RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 PDCD10Q9BUL8 212 aa11.95□□□□□ -0.5
TRAPPC12-203ENST00000411973 CACFD1Q9UGQ2 172 aa11.95□□□□□ -0.5
TRAPPC12-203ENST00000411973 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 IFNA17P01571 189 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 IGHV3-11P01762 117 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 PF4P02776 101 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 SULT1A3P0DMM9 295 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 SULT1A4P0DMN0 295 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DEFA4P12838 97 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DEFA1P59665 94 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DEFA3P59666 94 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DUSP18Q8NEJ0 188 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 PLEKHA3Q9HB20 300 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 F11RQ9Y624 299 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-203ENST00000411973 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 A0A1B0GU03 582 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 CYB5BO43169 146 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR2J3O76001 311 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 SLC25A6P12236 298 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 SPCS3P61009 180 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 ZNF343Q6P1L6 599 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 NRARPQ7Z6K4 114 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 FBXL7Q9UJT9 491 aa11.93□□□□□ -0.5
TRAPPC12-203ENST00000411973 PITX3O75364 302 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 NDUFB8O95169 186 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 HSPB1P04792 205 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 DEFA5Q01523 94 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR1P1Q8NH06 330 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 MITD1Q8WV92 249 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 THYN1Q9P016 225 aa11.92□□□□□ -0.5
TRAPPC12-203ENST00000411973 MFAP2P55001 183 aa11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 SPINK9Q5DT21 86 aa11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 FAM209BQ5JX69 171 aa11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 DPF1Q92782 380 aa11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 RANGRFQ9HD47 186 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
TRAPPC12-203ENST00000411973 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 A0A087WW49 117 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 LINC01619G3V211 115 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 IL5P05113 134 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 HOXB5P09067 269 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 EXOSC2Q13868 293 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 OR52B4Q8NGK2 314 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 ZNF431Q8TF32 576 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 CXorf58Q96LI9 332 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 ENY2Q9NPA8 101 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 FBN3Q75N90 2809 aa11.9□□□□□ -0.5
TRAPPC12-203ENST00000411973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 CD33P20138 364 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 SNCAP37840 140 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 HOXA1P49639 335 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 PVRIGQ6DKI7 326 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 PLET1Q6UQ28 207 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 PALMDQ9NP74 551 aa11.89□□□□□ -0.51
TRAPPC12-203ENST00000411973 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 ADAP1O75689 374 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 IFNA21P01568 189 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 ZP3P21754 424 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 CCDC140Q96MF4 163 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 SEC22CQ9BRL7 303 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 MARVELD1Q9BSK0 173 aa11.88□□□□□ -0.51
TRAPPC12-203ENST00000411973 ANKRD34BA5PLL1 514 aa11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 INMT-MINDY4F8WBC2 141 aa11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 K7EIM0 57 aa11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 TRBV12-3P01733 135 aa11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 RNASE2P10153 161 aaKnown RBP11.87□□□□□ -0.51
TRAPPC12-203ENST00000411973 HTR2BP41595 481 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms