RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PPP1R1AQ13522 171 aa18.38■□□□□ 0.53
UBE2E3-202ENST00000410062 IFNA17P01571 189 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 HIST1H1BP16401 226 aaKnown RBP18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 KLK9Q2XQG4 91 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 LYZL2Q7Z4W2 148 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 LGI3Q8N145 548 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 RANGRFQ9HD47 186 aaPredicted RBP18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 PEF1Q9UBV8 284 aaKnown RBP18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 KLK9Q9UKQ9 250 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 S4R3C0 116 aa18.37■□□□□ 0.53
UBE2E3-202ENST00000410062 DCUN1D4Q92564 292 aa18.36■□□□□ 0.53
UBE2E3-202ENST00000410062 DLX4Q92988 240 aaPredicted RBP18.36■□□□□ 0.53
UBE2E3-202ENST00000410062 PDCD10Q9BUL8 212 aa18.36■□□□□ 0.53
UBE2E3-202ENST00000410062 CACNG5Q9UF02 275 aa18.36■□□□□ 0.53
UBE2E3-202ENST00000410062 SFT2D2O95562 160 aa18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 IGHV3-23P01764 117 aa18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 SRPXP78539 464 aa18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 ANKRD55Q3KP44 614 aa18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 PLEKHA3Q9HB20 300 aa18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 F11RQ9Y624 299 aaKnown RBP18.35■□□□□ 0.53
UBE2E3-202ENST00000410062 A0A0B4J2A0 478 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 MFAP2P55001 183 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 SLC25A24Q6NUK1 477 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 SHPKQ9UHJ6 478 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 DUS4LO95620 317 aaKnown RBP18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 ANXA7P20073 488 aaKnown RBP18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 HOXD3P31249 432 aaPredicted RBP18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 BEAN1Q3B7T3 259 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 OR2C3Q8N628 320 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 MCRIP2Q9BUT9 160 aaKnown RBP18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 TBC1D24Q9ULP9 559 aa18.34■□□□□ 0.53
UBE2E3-202ENST00000410062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.33■□□□□ 0.52
UBE2E3-202ENST00000410062 MFSD2BA6NFX1 497 aa18.33■□□□□ 0.52
UBE2E3-202ENST00000410062 UPK1BO75841 260 aa18.33■□□□□ 0.52
UBE2E3-202ENST00000410062 UBE2MP61081 183 aaKnown RBP18.33■□□□□ 0.52
UBE2E3-202ENST00000410062 NMSQ5H8A3 153 aa18.33■□□□□ 0.52
UBE2E3-202ENST00000410062 OVOL1O14753 267 aa18.32■□□□□ 0.52
UBE2E3-202ENST00000410062 CYB5BO43169 146 aa18.32■□□□□ 0.52
UBE2E3-202ENST00000410062 C20orf85Q9H1P6 137 aa18.32■□□□□ 0.52
UBE2E3-202ENST00000410062 THYN1Q9P016 225 aa18.32■□□□□ 0.52
UBE2E3-202ENST00000410062 C9orf170A2RU37 121 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 NXPH3O95157 252 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 HLA-AP01891 365 aaKnown RBP18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 OR4E1P0C645 316 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 SULT1A3P0DMM9 295 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 SULT1A4P0DMN0 295 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 ZP3P21754 424 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 ERHP84090 104 aaKnown RBP18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 DEFA6Q01524 100 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 AARDQ4LEZ3 155 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 LRTM2Q8N967 370 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 EEF1AKMT3Q96AZ1 226 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 CCDC140Q96MF4 163 aa18.31■□□□□ 0.52
UBE2E3-202ENST00000410062 SEC14L6B5MCN3 397 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 PPP5D1E7EU14 171 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 BMPR1BO00238 502 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 TCRBP04435 133 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 HOXA1P49639 335 aaPredicted RBP18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 IFITM3Q01628 133 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 KPRPQ5T749 579 aaPredicted RBP18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 CLEC19AQ6UXS0 136 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 OR1P1Q8NH06 330 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 CXorf58Q96LI9 332 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 IGHV3-21A0A0B4J1V1 117 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 SPCS3P61009 180 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 DHRS2Q13268 280 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 C4orf46Q504U0 113 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 ZNF114Q8NC26 417 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 OR1L6Q8NGR2 347 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 OR52E5Q8NH55 327 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 ENY2Q9NPA8 101 aa18.3■□□□□ 0.52
UBE2E3-202ENST00000410062 TRAV6A0A075B6T7 132 aa18.29■□□□□ 0.52
UBE2E3-202ENST00000410062 DUXBA0A1W2PPF3 345 aa18.29■□□□□ 0.52
UBE2E3-202ENST00000410062 ASAH1Q13510 395 aa18.29■□□□□ 0.52
UBE2E3-202ENST00000410062 SMCO1Q147U7 214 aa18.29■□□□□ 0.52
UBE2E3-202ENST00000410062 RPEL1Q2QD12 228 aa18.29■□□□□ 0.52
UBE2E3-202ENST00000410062 PIGBOS1A0A0B4J2F0 54 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 FAM240BA0A1B0GVZ2 78 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 INS-IGF2F8WCM5 200 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 KLF5Q13887 457 aaPredicted RBP18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 MZT2BQ6NZ67 158 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 LYG2Q86SG7 212 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 MISP3Q96FF7 219 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 GPR61Q9BZJ8 451 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 NUDT15Q9NV35 164 aa18.28■□□□□ 0.52
UBE2E3-202ENST00000410062 TRBV7-1A0A0A6YYK4 115 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 PRB2P02812 416 aaPredicted RBP18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 HOXB5P09067 269 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 SNCAP37840 140 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 SYNJ2BPP57105 145 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 PDLIM3Q53GG5 364 aaPredicted RBP18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 C9orf66Q5T8R8 295 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 ZNF502Q8TBZ5 544 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 VN1R17PQ8TDU5 208 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 ZC4H2Q9NQZ6 224 aa18.27■□□□□ 0.52
UBE2E3-202ENST00000410062 K7EIM0 57 aa18.26■□□□□ 0.51
UBE2E3-202ENST00000410062 CLEC3BP05452 202 aa18.26■□□□□ 0.51
UBE2E3-202ENST00000410062 FAM209BQ5JX69 171 aa18.26■□□□□ 0.51
UBE2E3-202ENST00000410062 OR52B4Q8NGK2 314 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms