RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 VENTXO95231 258 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 RNASE2P10153 161 aaKnown RBP11.31□□□□□ -0.6
LIMS2-206ENST00000409754 MAS1LP35410 378 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 PEA15Q15121 130 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 PRSS8Q16651 343 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 GUK1Q16774 197 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
LIMS2-206ENST00000409754 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
LIMS2-206ENST00000409754 IGHV4-30-2A0A087WSY4 118 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-206ENST00000409754 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 CCDC144NLQ6NUI1 221 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 ACSM6Q6P461 480 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 CIARTQ8N365 385 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-206ENST00000409754 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 SFT2D1Q8WV19 159 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 CFHR4Q92496 578 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 KIAA1456Q9P272 454 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 SIGLEC9Q9Y336 463 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
LIMS2-206ENST00000409754 FAM157AC9JC47 383 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 E7EUB6 86 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 TOX4O94842 621 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 CNTFRP26992 372 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-206ENST00000409754 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
LIMS2-206ENST00000409754 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
LIMS2-206ENST00000409754 Q96MF0 132 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
LIMS2-206ENST00000409754 LSM4Q9Y4Z0 139 aaKnown RBP11.29□□□□□ -0.6
LIMS2-206ENST00000409754 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 MED13LQ71F56 2210 aa11.29□□□□□ -0.6
LIMS2-206ENST00000409754 A0A1B0GV50 99 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 APOC3P02656 99 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 UBE2E1P51965 193 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 CCL20P78556 96 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 PRSS57Q6UWY2 283 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
LIMS2-206ENST00000409754 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
LIMS2-206ENST00000409754 MTORP42345 2549 aa11.28□□□□□ -0.6
LIMS2-206ENST00000409754 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 A0A1W2PRD5 423 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 A0A1W2PRF3 423 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 A0A1W2PRM7 423 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 F8W036 122 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 ACTL6BO94805 426 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 MOSP00540 346 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 IGKV1D-33P01593 117 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 IGKV1-33P01594 117 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 OPRK1P41145 380 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.6
LIMS2-206ENST00000409754 SUB1P53999 127 aaKnown RBP eCLIP11.27□□□□□ -0.6
LIMS2-206ENST00000409754 LGALS4P56470 323 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 WT1-ASQ06250 92 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 HNF4GQ14541 408 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 CLEC12BQ2HXU8 276 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.6
LIMS2-206ENST00000409754 MGST2Q99735 147 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.6
LIMS2-206ENST00000409754 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.6
LIMS2-206ENST00000409754 C9JQL5 133 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 M6PRP20645 277 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-206ENST00000409754 DSCR9P59020 149 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 TNXAQ16473 311 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 ACOT6Q3I5F7 207 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-206ENST00000409754 TEPPQ6URK8 271 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 NPBQ8NG41 125 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 OR10G4Q8NGN3 311 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 OR10G9Q8NGN4 311 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 OR10G7Q8NGN6 311 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 C1orf159Q96HA4 380 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 GGTLC1Q9BX51 225 aa11.27□□□□□ -0.61
LIMS2-206ENST00000409754 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 RBFOX3A6NFN3 312 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 SCO1O75880 301 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 OR13C7P0DN81 318 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
LIMS2-206ENST00000409754 CD69Q07108 199 aa11.26□□□□□ -0.61
LIMS2-206ENST00000409754 RAB31Q13636 194 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms