RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 SPNS3Q6ZMD2 512 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 Q6ZS46 218 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 ZNF596Q8TC21 504 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 C20orf24Q9BUV8 137 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 RBKSQ9H477 322 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 TMED3Q9Y3Q3 217 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 S4R3C0 116 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 EREGO14944 169 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 AGPAT2O15120 278 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 FGF16O43320 207 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 VENTXO95231 258 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 METTL15P1P0C7V9 234 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 SLC25A16P16260 332 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 HLA-GP17693 338 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 RELBQ01201 579 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 CFHR4Q92496 578 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 IGSF23A1L1A6 192 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 C9JQL5 133 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 PRH1P02810 166 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 GAPDHP04406 335 aaKnown RBP9.35□□□□□ -0.91
SKA3-203ENST00000400018 P0C879 139 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 PAX1P15863 534 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 KIAA0141Q14154 515 aaPredicted RBP9.35□□□□□ -0.91
SKA3-203ENST00000400018 OR8G2PQ6IF36 304 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 LINC00311Q8N616 119 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 BEND2Q8NDZ0 799 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 NMES1Q9C002 83 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
SKA3-203ENST00000400018 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 APOA2P02652 100 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 PLGLAQ15195 96 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 RTL8BQ17RB0 113 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 MRGPRG-AS1Q2M3A8 158 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 TMED6Q8WW62 240 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 RAB9BQ9NP90 201 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 MMP24Q9Y5R2 645 aa9.35□□□□□ -0.91
SKA3-203ENST00000400018 NSD1Q96L73 2696 aaPredicted RBP9.35□□□□□ -0.91
SKA3-203ENST00000400018 CEBPZOSA8MTT3 80 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 PITX3O75364 302 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 DEDDO75618 318 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 RAB4AP20338 218 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 OR2F1Q13607 317 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
SKA3-203ENST00000400018 WASHC3Q9Y3C0 194 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 IGHV1-69DA0A0B4J2H0 117 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 IGHV1-69P01742 117 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 UBE2E1P51965 193 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 GPR157Q5UAW9 335 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
SKA3-203ENST00000400018 C7orf77A4D0Y5 90 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 CGB1A6NKQ9 187 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 NPSP0C0P6 89 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 HKR1P10072 659 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 UBE2KP61086 200 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 ERVK-16P61578 105 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 TNXAQ16473 311 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 DEFB112Q30KQ8 113 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 AWAT1Q58HT5 328 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 GFI1BQ5VTD9 330 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
SKA3-203ENST00000400018 DOK5Q9P104 306 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 ITGB1BP1O14713 200 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 RRHO14718 337 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 SSBP2P81877 361 aaPredicted RBP9.33□□□□□ -0.92
SKA3-203ENST00000400018 ID3Q02535 119 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 CACFD1Q9UGQ2 172 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 GOLT1BQ9Y3E0 138 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 H3BUX3 64 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 SYNGR2O43760 224 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 AREGP15514 252 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
SKA3-203ENST00000400018 ZNF137PP52743 207 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 NDPQ00604 133 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 LOXL1Q08397 574 aaPredicted RBP9.33□□□□□ -0.92
SKA3-203ENST00000400018 ZNF345Q14585 488 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 TMEM95Q3KNT9 176 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 PRSS54Q6PEW0 395 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 ACOT7LQ6ZUV0 252 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 HAPLN4Q86UW8 402 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 OR4C13Q8NGP0 309 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 TMEM170AQ8WVE7 144 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 FBXO7Q9Y3I1 522 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 OR51B2Q9Y5P1 312 aa9.33□□□□□ -0.92
SKA3-203ENST00000400018 M0R036 132 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 PHOX2AO14813 284 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 IGHV4-59P01825 116 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 DEFA4P12838 97 aa9.32□□□□□ -0.92
SKA3-203ENST00000400018 IL3RAP26951 378 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms