RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SERF1AO75920 110 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 CGAP01215 116 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 KCNE5Q9UJ90 142 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 ARFGEF3Q5TH69 2177 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 PTPRFP10586 1907 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 NPIPB6E9PJ23 425 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 TMEM249Q2WGJ8 235 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 NPIPB3Q92617 1050 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 TMEM106BQ9NUM4 274 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 PILRAQ9UKJ1 303 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 DOCK11Q5JSL3 2073 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 OR11H12B2RN74 326 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 LCNL1Q6ZST4 164 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 OR11H1Q8NG94 326 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 OR11H2Q8NH07 326 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 ZNF48Q96MX3 618 aaPredicted RBP7.9□□□□□ -1.14
ATL3-201ENST00000398868 TRBV7-9A0A0J9YWB2 115 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 MSGN1A6NI15 193 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 EVI2AP22794 236 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 IGHV1-2P23083 117 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 ATP5G3P48201 142 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 MFAP4P55083 255 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 TFF3Q07654 80 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 FOXF2Q12947 444 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 TPTE2P1Q5T6R2 138 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 MARF1Q9Y4F3 1742 aaKnown RBP7.9□□□□□ -1.14
ATL3-201ENST00000398868 MGST3O14880 152 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 ZP1P60852 638 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 SPSB4Q96A44 273 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 AICDAQ9GZX7 198 aa7.9□□□□□ -1.14
ATL3-201ENST00000398868 PGPEP1LA6NFU8 196 aa7.9□□□□□ -1.15
ATL3-201ENST00000398868 NPPCP23582 126 aa7.9□□□□□ -1.15
ATL3-201ENST00000398868 DMRTC2Q8IXT2 367 aaPredicted RBP7.9□□□□□ -1.15
ATL3-201ENST00000398868 RNASE7Q9H1E1 156 aaKnown RBP7.9□□□□□ -1.15
ATL3-201ENST00000398868 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.15
ATL3-201ENST00000398868 PAX2Q02962 417 aa7.9□□□□□ -1.15
ATL3-201ENST00000398868 JMJD8Q96S16 334 aa7.9□□□□□ -1.15
ATL3-201ENST00000398868 WNK2Q9Y3S1 2297 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PPIFP30405 207 aaKnown RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 SCGB3A1Q96QR1 104 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 PATJQ8NI35 1801 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 FGF12P61328 243 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 SNRPD3P62318 126 aaKnown RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 FAM27BQ5VT28 67 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 TTC9CQ8N5M4 171 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 TMEM222Q9H0R3 208 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PARP14Q460N5 1801 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 IGKV1D-43A0A0B4J1Z2 117 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 FOXH1O75593 365 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PRR30Q53SZ7 412 aaPredicted RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 EEF1AKMT3Q96AZ1 226 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 WDYHV1Q96HA8 205 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PSME4Q14997 1843 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 KIF26BQ2KJY2 2108 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 TRAV2A0A0B4J234 112 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 A0A1W2PS18 150 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PINLYPA6NC86 204 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 H0Y980 276 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PRB1P04280 392 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 HOXA5P20719 270 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 FAM71F2Q6NXP2 309 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 ZNF818PQ6ZRF7 136 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 TCF24Q7RTU0 167 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 LINC00305Q7Z4B0 112 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 STHQ8IWL8 128 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 SLC25A38Q96DW6 304 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 SDHCQ99643 169 aaPredicted RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 PSMG3Q9BT73 122 aaPredicted RBP7.89□□□□□ -1.15
ATL3-201ENST00000398868 SFXN3Q9BWM7 321 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 WDR82Q6UXN9 313 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 PRELID3AQ96N28 172 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 COL4A6Q14031 1691 aa7.89□□□□□ -1.15
ATL3-201ENST00000398868 LEPP41159 167 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 C8orf82Q6P1X6 216 aaPredicted RBP7.88□□□□□ -1.15
ATL3-201ENST00000398868 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 SMDT1Q9H4I9 107 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 STPG3Q8N7X2 389 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 OR4X2Q8NGF9 303 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 OR51G1Q8NGK1 321 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 NRN1Q9NPD7 142 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 PLSCR2Q9NRY7 297 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 METRNQ9UJH8 293 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 FBXL7Q9UJT9 491 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 DYSFO75923 2080 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 CEACAM4O75871 244 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 TNS1Q9HBL0 1735 aaKnown RBP7.88□□□□□ -1.15
ATL3-201ENST00000398868 SAP30O75446 220 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 ICAM4Q14773 271 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 ZNF329Q86UD4 541 aa7.88□□□□□ -1.15
ATL3-201ENST00000398868 SIPA1L3O60292 1781 aaPredicted RBP7.88□□□□□ -1.15
ATL3-201ENST00000398868 GCHFRP30047 84 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms