RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SRFP11831 508 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 MFAP2P55001 183 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 TNXAQ16473 311 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LHFPL4Q7Z7J7 247 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 SLC25A40Q8TBP6 338 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LOXL4Q96JB6 756 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 TAAR6Q96RI8 345 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 PCED1AQ9H1Q7 454 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF331Q9NQX6 463 aaPredicted RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 U3KQA8 63 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 ARL2-SNX15V9GYD0 113 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 PATE3B3GLJ2 98 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LYZL6O75951 148 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 TCTAP57738 103 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 ERVK-16P61578 105 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 RHOBP62745 196 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 SLAQ13239 276 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 NIT1Q86X76 327 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 KLHDC1Q8N7A1 406 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 COQ2Q96H96 371 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF355PQ9NSJ1 428 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 MBNL3Q9NUK0 354 aaKnown RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 CDC42EP3Q9UKI2 254 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 NCKAP5O14513 1909 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 CACNA1GO43497 2377 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 NKX6-3A6NJ46 265 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 CTRLP40313 264 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 OPRK1P41145 380 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 DUSP3P51452 185 aaPredicted RBP8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 PRRX1P54821 245 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 FOXA3P55318 350 aaPredicted RBP8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 Q0VG73 95 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 OR1C1Q15619 314 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 PKIBQ9C010 78 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 DEFB127Q9H1M4 99 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 WDR54Q9H977 334 aa8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.1
PTCHD4-202ENST00000398738 P0C879 139 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 ARG2P78540 354 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 UBE2V1Q13404 147 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF718Q3SXZ3 478 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 FBLN7Q53RD9 439 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 UTF1Q5T230 341 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 KIR3DL3Q8N743 410 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 WASHC3Q9Y3C0 194 aa8.15□□□□□ -1.11
PTCHD4-202ENST00000398738 OOEPA6NGQ2 149 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 SNAI2O43623 268 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 AGFG2O95081 481 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 MT-CO2P00403 227 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 KLF3P57682 345 aaPredicted RBP8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF596Q8TC21 504 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 SFXN3Q9BWM7 321 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 NPVFQ9HCQ7 196 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 COX11Q9Y6N1 276 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 IGLL1P15814 213 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 MPV17P39210 176 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 CLDN18P56856 261 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 Q8TCH9 128 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 ENY2Q9NPA8 101 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 DUSP13Q9UII6 198 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 BOKQ9UMX3 212 aaPredicted RBP8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 TCF19Q9Y242 345 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 KIAA1549Q9HCM3 1950 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 LOC105371242A0A075B767 164 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 TRAV5A0A0B4J249 113 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 PROP1O75360 226 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 CX3CL1P78423 397 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 RPL19P84098 196 aaKnown RBP8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 RAB31Q13636 194 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 TRIP6Q15654 476 aaKnown RBP8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 MPV17L2Q567V2 206 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 PPP1R32Q7Z5V6 425 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 OR8B2Q96RD0 313 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 TMEM140Q9NV12 185 aa8.14□□□□□ -1.11
PTCHD4-202ENST00000398738 BOD1L1Q8NFC6 3051 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 IGHV3OR15-7A0A075B7D8 119 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 SPINT2O43291 252 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 PLAUP00749 431 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 PF4V1P10720 104 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 LPAL2Q16609 132 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 TBC1D28Q2M2D7 210 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 EBLN2Q6P2I7 272 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 RAB1CQ92928 201 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 hDV102S1A0JD36 115 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 IL11RAQ14626 422 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 DCAF12Q5T6F0 453 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF841Q6ZN19 808 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 SAP25Q8TEE9 199 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms