RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SLC38A11Q08AI6 406 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 C9orf64Q5T6V5 341 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 TMEM86AQ8N2M4 240 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 ZNF676Q8N7Q3 588 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PRAP1Q96NZ9 151 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 NIPSNAP1Q9BPW8 284 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 DERL1Q9BUN8 251 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PRTFDC1Q9NRG1 225 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.92□□□□□ -2.26
CD47-203ENST00000398258 SLC22A13Q9Y226 551 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 RTTNQ86VV8 2226 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PTPRSQ13332 1948 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 NISCHQ9Y2I1 1504 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 IGKV1D-43A0A0B4J1Z2 117 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 TRAPPC13A5PLN9 417 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 OR4C46A6NHA9 309 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 FABP5P3A8MUU1 101 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 IBA57-AS1B1ANH7 110 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 FAAHO00519 579 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 SLC22A1O15245 554 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 ATP5HO75947 161 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 HAND1O96004 215 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 CTXN2P0C2S0 81 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 GPX2P18283 190 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 RPL5P46777 297 aaKnown RBP0.91□□□□□ -2.26
CD47-203ENST00000398258 AQP4P55087 323 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 AP3S2P59780 193 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 RPS20P60866 119 aaKnown RBP0.91□□□□□ -2.26
CD47-203ENST00000398258 ERVS71-1P61550 626 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 FADDQ13158 208 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 STX5Q13190 355 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 Q1T7F1 81 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 IAH1Q2TAA2 248 aaPredicted RBP0.91□□□□□ -2.26
CD47-203ENST00000398258 TMEM155Q4W5P6 130 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 AADACL3Q5VUY0 350 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 SPOPLQ6IQ16 392 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 LPCAT3Q6P1A2 487 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 RPL22L1Q6P5R6 122 aaKnown RBP0.91□□□□□ -2.26
CD47-203ENST00000398258 DHFR2Q86XF0 187 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 C10orf126Q8N4M7 172 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 C12orf45Q8N5I9 185 aaPredicted RBP0.91□□□□□ -2.26
CD47-203ENST00000398258 ANKRD29Q8N6D5 301 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 RASSF5Q8WWW0 418 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 C11orf40Q8WZ69 217 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 DCUN1D1Q96GG9 259 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 FBXL12Q9NXK8 326 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 TP73-AS1Q9UF72 201 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 LHFPL6Q9Y693 200 aa0.91□□□□□ -2.26
CD47-203ENST00000398258 CPAMD8Q8IZJ3 1885 aa0.9□□□□□ -2.26
CD47-203ENST00000398258 CR1P17927 2039 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 TRGV2A0A075B6R0 118 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 TRAV26-2A0A0B4J265 109 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 FAM236DA0A1B0GTK5 79 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 SMIM9A6NGZ8 99 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 TMEM210A6NLX4 147 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 C19orf84I3L1E1 186 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 FAM236CP0DP71 79 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BOP23527 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BBP33778 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 AKR1C3P42330 323 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BDP58876 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BCP62807 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 SUPT4H1P63272 117 aaKnown RBP0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H3AP68431 136 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HBA1P69905 142 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 MRPS15P82914 257 aaKnown RBP0.9□□□□□ -2.27
CD47-203ENST00000398258 H3F3AP84243 136 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 REEP5Q00765 189 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 SRSF6Q13247 344 aaKnown RBP0.9□□□□□ -2.27
CD47-203ENST00000398258 EDDM3AQ14507 147 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 MOGQ16653 247 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 NDUFA5Q16718 116 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST2H2BEQ16778 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 ARHGAP11BQ3KRB8 267 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.9□□□□□ -2.27
CD47-203ENST00000398258 SLC36A1Q7Z2H8 476 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 BPIFA4PQ86YQ2 179 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 DEFB119Q8N690 84 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 PFN4Q8NHR9 129 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 MBD3L1Q8WWY6 194 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BHQ93079 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BNQ99877 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 HIST1H2BMQ99879 126 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 DCSTAMPQ9H295 470 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 UQCC1Q9NVA1 299 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 C14orf105Q9NVL8 296 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 PRELID3BQ9Y3B1 194 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 TMEM56-RWDD3S4R434 201 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 TONSLQ96HA7 1378 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 ROBO3Q96MS0 1386 aa0.9□□□□□ -2.27
CD47-203ENST00000398258 STRCQ7RTU9 1775 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 ERCC6Q03468 1493 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 KIF24Q5T7B8 1368 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 EXOC1LA0A1B0GW35 172 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 FADS1O60427 444 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 CNIH1O95406 144 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 CRYZL1O95825 349 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 IFNA6P05013 189 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 METTL15P1P0C7V9 234 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 EIF2B2P49770 351 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms