RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 A0A1W2PRM7 423 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 CDIPTO14735 213 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 GZMHP20718 246 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 CLDN18P56856 261 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 POU2AF1Q16633 256 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 PRNTQ86SH4 94 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 DTX1Q86Y01 620 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 PLPPR1Q8TBJ4 325 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 PAXXQ9BUH6 204 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 C19orf24Q9BVV8 132 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
PTPRD-205ENST00000397611 C5orf63A6NC05 138 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 H7C2G1 150 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 RRHO14718 337 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TNFSF15O95150 251 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 CLDN14O95500 239 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ESDP10768 282 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 FBXW9Q5XUX1 488 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 INO80CQ6PI98 192 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 RPP25LQ8N5L8 163 aaKnown RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 HIST1H4GQ99525 98 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 AP5S1Q9NUS5 200 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 IGHV3-21A0A0B4J1V1 117 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 hADV38S2A0JD32 116 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 NPY1RP25929 384 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 DCAF12Q5T6F0 453 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 SSBP4Q9BWG4 385 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 KLRC4-KLRK1H3BQV0 150 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 CUL9Q8IWT3 2517 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TRGV10A0A0A0MS01 117 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 IGKV1D-13A0A0B4J2D9 117 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 OOEPA6NGQ2 149 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 IGKV1-13P0DP09 117 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 CD46P15529 392 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 CDKN1AP38936 164 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 YPEL3P61236 119 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 GNB2P62879 340 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 H3BTX0 84 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 MMP23AO75900 390 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ACP1P24666 158 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 VMA21Q3ZAQ7 101 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 KRTCAP3Q53RY4 240 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 Q6ZPA2 131 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 GRAMD2BQ96HH9 432 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 SYNGR1O43759 233 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 IGKV1-5P01602 117 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TDGF1P13385 188 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF837Q96EG3 531 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 SRXN1Q9BYN0 137 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 OR51B2Q9Y5P1 312 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 DNAH12Q6ZR08 3092 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 NCBP2LA6PVI3 153 aaKnown RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF324O75467 553 aaPredicted RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 RPL31P62899 125 aaKnown RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 RPL11P62913 178 aaKnown RBP4.57□□□□□ -1.68
PTPRD-205ENST00000397611 LPAL2Q16609 132 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TMEM177Q53S58 311 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 WFDC8Q8IUA0 241 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ZADH2Q8N4Q0 377 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ORAOV1Q8WV07 137 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 ZDHHC16Q969W1 377 aa4.57□□□□□ -1.68
PTPRD-205ENST00000397611 TRAV24A0A0B4J272 114 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 M0R1B8 84 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 M0R296 226 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 CD40P25942 277 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 EMP1P54849 157 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF585BQ52M93 769 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 PNKDQ8N490 385 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-205ENST00000397611 NPVFQ9HCQ7 196 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 TGFAP01135 160 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 IL6RP08887 468 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-205ENST00000397611 SELENOTP62341 195 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 MRPS11P82912 194 aaKnown RBP4.56□□□□□ -1.68
PTPRD-205ENST00000397611 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 TMEM178AQ8NBL3 297 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 BMI1P35226 326 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF295-AS1Q8N0V1 137 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 PERPQ96FX8 193 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 SPTBN2O15020 2390 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 C9JCJ5 164 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 TMEM144Q7Z5S9 345 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 OR2Z1Q8NG97 314 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 CLEC5AQ9NY25 188 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 CACNA1AO00555 2505 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 LRRC30A6NM36 301 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 SPRY3O43610 288 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 CGAP01215 116 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 LIPFP07098 398 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 OCIAD2Q56VL3 154 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 ZNF497Q6ZNH5 498 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 STPG3Q8N7X2 389 aa4.56□□□□□ -1.68
PTPRD-205ENST00000397611 CDX2Q99626 313 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms