RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 OR10X1Q8NGY0 326 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 TAF15Q92804 592 aaKnown RBP eCLIP11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 LHX4Q969G2 390 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 AMMECR1Q9Y4X0 333 aaPredicted RBP11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 PROP1O75360 226 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 IL3RAP26951 378 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 KRTAP1-1Q07627 177 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 SLC38A11Q08AI6 406 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF674Q2M3X9 581 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 CENPVQ7Z7K6 275 aaPredicted RBP11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 ST6GALNAC6Q969X2 333 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 OR51M1Q9H341 326 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 RBKSQ9H477 322 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 CENPVL3A0A0U1RRI6 287 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 BUB1B-PAK6H3BSN5 160 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 AVPP01185 164 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 IFNA1P01562 189 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 RND2P52198 227 aa11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 RPL30P62888 115 aaKnown RBP11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 C1orf229Q6ZS94 237 aaPredicted RBP11.98□□□□□ -0.49
TM9SF1-202ENST00000396854 TGIF2-C20orf24A0A0A6YYL0 155 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 UBE2L5PA0A1B0GUS4 154 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 CD5LO43866 347 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 CDX1P47902 265 aaPredicted RBP11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 FGF8P55075 233 aaPredicted RBP11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 RPL39P5Q59GN2 51 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 S1PR3Q99500 378 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 SDF2L1Q9HCN8 221 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
TM9SF1-202ENST00000396854 TRAV40A0A0B4J280 105 aa11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 RAMP3O60896 148 aa11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 HTR1DP28221 377 aa11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
TM9SF1-202ENST00000396854 TEX15Q9BXT5 2789 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 LINC00587B1AMM8 73 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 S100PP25815 95 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 ATP6V1FQ16864 119 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 LDLRAD2Q5SZI1 272 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 DPM3Q9P2X0 92 aa11.96□□□□□ -0.5
TM9SF1-202ENST00000396854 IGHV1-69DA0A0B4J2H0 117 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CLDN34H7C241 214 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CYB5BO43169 146 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 TGOLN2O43493 480 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 YIF1AO95070 293 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 IGHV1-69P01742 117 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 ZNF816Q0VGE8 651 aaPredicted RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 DOK5Q9P104 306 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 IFITM10A6NMD0 228 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 LINC00473A8K010 186 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 M0R1X1 148 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 NPFFO15130 113 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 G6PCP35575 357 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 CEACAM3P40198 252 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 ELLP55199 621 aaPredicted RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 NDUFA6P56556 154 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 BRWD1-AS2P59051 145 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 KLF17Q5JT82 389 aaPredicted RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 RPP25LQ8N5L8 163 aaKnown RBP11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 TMEM147Q9BVK8 224 aa11.95□□□□□ -0.5
TM9SF1-202ENST00000396854 SVEP1Q4LDE5 3571 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 PMS2P5A8MQ11 134 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 S1PR2O95136 353 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 KRASP01116 189 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 FSHBP01225 129 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 IGKV1D-33P01593 117 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 IGKV1-33P01594 117 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 IGHV4-38-2P0DP08 117 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 LGALS4P56470 323 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms