RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RRNAD1Q96FB5 475 aaKnown RBP9.68□□□□□ -0.86
GGPS1-203ENST00000391855 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 MCUBQ9NWR8 336 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
GGPS1-203ENST00000391855 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
GGPS1-203ENST00000391855 PIGBOS1A0A0B4J2F0 54 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 TEX13DA0A0J9YY54 714 aaPredicted RBP9.67□□□□□ -0.86
GGPS1-203ENST00000391855 LGALS9O00182 355 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 GP9P14770 177 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 ETV6P41212 452 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 SPANXN2Q5MJ10 180 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 CLEC19AQ6UXS0 136 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 GPHB5Q86YW7 130 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 Q8N402 240 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 TOMM5Q8N4H5 51 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 ZNF114Q8NC26 417 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 OR2K2Q8NGT1 345 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 RNASE11Q8TAA1 199 aaKnown RBP9.67□□□□□ -0.86
GGPS1-203ENST00000391855 ZNF502Q8TBZ5 544 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 TRIM63Q969Q1 353 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 PDCD10Q9BUL8 212 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 TMEM222Q9H0R3 208 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 PLEKHA3Q9HB20 300 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
GGPS1-203ENST00000391855 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 CRYM-AS1A6NIL9 109 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 DBX1A6NMT0 343 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 CDS2O95674 445 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 IGKV1-5P01602 117 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 CSN3P07498 182 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 OR5AC1P0C628 307 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 P0C879 139 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 SPNP16150 400 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 ERHP84090 104 aaKnown RBP9.66□□□□□ -0.86
GGPS1-203ENST00000391855 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
GGPS1-203ENST00000391855 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 LCN12Q6JVE5 192 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 SGPP2Q8IWX5 399 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 OR2C3Q8N628 320 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
GGPS1-203ENST00000391855 GAR1Q9NY12 217 aaKnown RBP9.66□□□□□ -0.86
GGPS1-203ENST00000391855 KCNIP3Q9Y2W7 256 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
GGPS1-203ENST00000391855 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 CD69Q07108 199 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 ZNF79Q15937 498 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 SP6Q3SY56 376 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 SLC35G3Q8N808 338 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 RBPMSQ93062 196 aaKnown RBP9.65□□□□□ -0.86
GGPS1-203ENST00000391855 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 GALNT14Q96FL9 552 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
GGPS1-203ENST00000391855 A8MWP6 167 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 OR2C1O95371 312 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 IGHV3-23P01764 117 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 ANXA3P12429 323 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 GPR183P32249 361 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 SRPXP78539 464 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 SPSB3Q6PJ21 355 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 PLET1Q6UQ28 207 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 DYNLRB2Q8TF09 96 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 GLYATL2Q8WU03 294 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 BSCL2Q96G97 398 aaPredicted RBP9.65□□□□□ -0.87
GGPS1-203ENST00000391855 PALMDQ9NP74 551 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 S4R3C0 116 aa9.65□□□□□ -0.87
GGPS1-203ENST00000391855 A0A0B4J293 547 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 CORTO00230 105 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 TGOLN2O43493 480 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 IFNA17P01571 189 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 CLEC3BP05452 202 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
GGPS1-203ENST00000391855 MFAP2P55001 183 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 ELLP55199 621 aaPredicted RBP9.64□□□□□ -0.87
GGPS1-203ENST00000391855 AARDQ4LEZ3 155 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 OR52E5Q8NH55 327 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 SLC25A21Q9BQT8 299 aaPredicted RBP9.64□□□□□ -0.87
GGPS1-203ENST00000391855 SRRQ9GZT4 340 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 ENY2Q9NPA8 101 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 TECRQ9NZ01 308 aaKnown RBP9.64□□□□□ -0.87
GGPS1-203ENST00000391855 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
GGPS1-203ENST00000391855 SORL1Q92673 2214 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 K7EIM0 57 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 HLA-AP01891 365 aaKnown RBP9.63□□□□□ -0.87
GGPS1-203ENST00000391855 FCGR2BP31994 310 aaPredicted RBP9.63□□□□□ -0.87
GGPS1-203ENST00000391855 SNCAP37840 140 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 INPP1P49441 399 aa9.63□□□□□ -0.87
GGPS1-203ENST00000391855 HOXA1P49639 335 aaPredicted RBP9.63□□□□□ -0.87
GGPS1-203ENST00000391855 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■■ 30.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms