RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ELOA3CA0A087WX78 387 aaPredicted RBP9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 TRGV8A0A0C4DH27 118 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 F6UZH7 168 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 ENSAO43768 121 aaKnown RBP9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 GOSR1O95249 250 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 GLRXP35754 106 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 CT45A1Q5HYN5 189 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 SPATA31B1PQ5VZV4 182 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 OR4A47Q6IF82 309 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 TRAT1Q6PIZ9 186 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 ST6GALNAC3Q8NDV1 305 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 CT45A3Q8NHU0 189 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 SLC35D1Q9NTN3 355 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 TIMM9Q9Y5J7 89 aa9.95□□□□□ -0.82
CAPRIN1-202ENST00000389645 CCL25O15444 150 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 OR10J4P0C629 311 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 ERVFC1-1P60608 527 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 TMEM108Q6UXF1 575 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 SGMS2Q8NHU3 365 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 CTDSP1Q9GZU7 261 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 ACACBO00763 2458 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 CACNA1AO00555 2505 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 J3QR06 171 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 HTD2P86397 168 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 IFI27L2Q9H2X8 130 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 SERTAD4Q9NUC0 356 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 TMEM250H0YL14 139 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 MMP23AO75900 390 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 CA2P00918 260 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 CCL3L1P16619 93 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 RAB7AP51149 207 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 SLC35B1P78383 322 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 Q8TCH9 128 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
CAPRIN1-202ENST00000389645 DCHS2Q6V1P9 2916 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 IGFBP2P18065 325 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 CHRNB4P30926 498 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 BRS3P32247 399 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 MLANAQ16655 118 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 MBNL2Q5VZF2 373 aaKnown RBP9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 SEPSECSQ9HD40 501 aaKnown RBP9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 DYNLRB1Q9NP97 96 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 OR51B2Q9Y5P1 312 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 IGHV3-72A0A0B4J1Y9 119 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 HRASP01112 189 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 ZNF90Q03938 601 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 LY6DQ14210 128 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 PSG5Q15238 335 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 NPVFQ9HCQ7 196 aa9.93□□□□□ -0.82
CAPRIN1-202ENST00000389645 PMS2P5A8MQ11 134 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 C16orf97H3BN30 126 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 IGKV1-16P04430 117 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 MGST1P10620 155 aaKnown RBP9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 GNB1P62873 340 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TCF23Q7RTU1 214 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 COMMD5Q9GZQ3 224 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 ZNF835Q9Y2P0 537 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 YPEL1O60688 119 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 RPL31P62899 125 aaKnown RBP9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 LEMD1Q68G75 181 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TOMM20LQ6UXN7 152 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 C1orf229Q6ZS94 237 aaPredicted RBP9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 YPEL2Q96QA6 119 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 MGST2Q99735 147 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 SLC17A3O00476 420 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 FOXH1O75593 365 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TCL1AP56279 114 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 GNB2P62879 340 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 RELBQ01201 579 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 MMDQ15546 238 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 RTL8BQ17RB0 113 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TANC2Q9HCD6 1990 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 PITPNC1Q9UKF7 332 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 TACC2O95359 2948 aa9.92□□□□□ -0.82
CAPRIN1-202ENST00000389645 IGHV1-46P01743 117 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 IL6RP08887 468 aaPredicted RBP9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 PAX1P15863 534 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 NPPCP23582 126 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 CD40P25942 277 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 ZNF114Q8NC26 417 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 OR10W1Q8NGF6 305 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 GGTLC1Q9BX51 225 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 IGHV3-21A0A0B4J1V1 117 aa9.91□□□□□ -0.82
CAPRIN1-202ENST00000389645 MT-CO2P00403 227 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms