RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 BBC3Q96PG8 261 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-203ENST00000381209 SIRPDQ9H106 197 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 MINOS1-NBL1R4GNA1 71 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 SMG1Q96Q15 3661 aaKnown RBP13.87□□□□□ -0.19
RPAIN-203ENST00000381209 ZFP92A6NM28 416 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
RPAIN-203ENST00000381209 KLRD1Q13241 179 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 MIC13Q5XKP0 118 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 PPP1R27Q86WC6 154 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 CFHR4Q92496 578 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 CCL19Q99731 98 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 METTL1Q9UBP6 276 aaKnown RBP13.86□□□□□ -0.19
RPAIN-203ENST00000381209 KALRNO60229 2985 aa13.86□□□□□ -0.19
RPAIN-203ENST00000381209 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 FOXH1O75593 365 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 CNTFRP26992 372 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-203ENST00000381209 B2MP61769 119 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRR20EP86478 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRR20CP86479 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRR20DP86480 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRR20BP86481 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRR20AP86496 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PVRIGQ6DKI7 326 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 CCDC144NLQ6NUI1 221 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 ZNF114Q8NC26 417 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 PRB1P04280 392 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 RNF224P0DH78 156 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 HOXB4P17483 251 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-203ENST00000381209 LCN2P80188 198 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 GAMTQ14353 236 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 TNXAQ16473 311 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 SLC16A13Q7RTY0 426 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 ZNF843Q8N446 348 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 STPG3Q8N7X2 389 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 CYB561D1Q8N8Q1 229 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 SLC35E1Q96K37 410 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
RPAIN-203ENST00000381209 POLR3KQ9Y2Y1 108 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-203ENST00000381209 NUPL2O15504 423 aaKnown RBP13.84□□□□□ -0.19
RPAIN-203ENST00000381209 PSMB3P49720 205 aa13.84□□□□□ -0.19
RPAIN-203ENST00000381209 GCSAMLQ5JQS6 135 aa13.84□□□□□ -0.19
RPAIN-203ENST00000381209 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
RPAIN-203ENST00000381209 SSMEM1Q8WWF3 244 aa13.84□□□□□ -0.19
RPAIN-203ENST00000381209 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
RPAIN-203ENST00000381209 HILPDAQ9Y5L2 63 aa13.84□□□□□ -0.19
RPAIN-203ENST00000381209 ACACBO00763 2458 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 NDUFS8O00217 210 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
RPAIN-203ENST00000381209 MOSP00540 346 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 RHEBQ15382 184 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 AWAT1Q58HT5 328 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 NPBQ8NG41 125 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 FBXL15Q9H469 300 aa13.83□□□□□ -0.2
RPAIN-203ENST00000381209 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
RPAIN-203ENST00000381209 M0R036 132 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 TSPAN4O14817 238 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 EIF3GO75821 320 aaKnown RBP eCLIP13.82□□□□□ -0.2
RPAIN-203ENST00000381209 TOX4O94842 621 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 NDUFA3O95167 84 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 FBP1P09467 338 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 LINC00869P0C866 280 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 LGALS4P56470 323 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 TMPRSS5Q9H3S3 457 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 SMCO4Q9NRQ5 59 aa13.82□□□□□ -0.2
RPAIN-203ENST00000381209 TET2Q6N021 2002 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-203ENST00000381209 C7orf77A4D0Y5 90 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 NBR2O15453 112 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 TSPAN9O75954 239 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
RPAIN-203ENST00000381209 STAG3L2P0CL84 134 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 STAG3L3P0CL85 134 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 UBE2E1P51965 193 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 RHOBP62745 196 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 MEF2BQ02080 365 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-203ENST00000381209 MMDQ15546 238 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 TMEM88Q6PEY1 159 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 CBLN2Q8IUK8 224 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 OR2T10Q8NGZ9 312 aa13.81□□□□□ -0.2
RPAIN-203ENST00000381209 SPTBN1Q01082 2364 aaKnown RBP13.81□□□□□ -0.2
RPAIN-203ENST00000381209 DOCK11Q5JSL3 2073 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 H3BQ15 152 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 CORTO00230 105 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 OR10J1P30954 320 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 PLGLAQ15195 96 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 MLANAQ16655 118 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 FAM90A2PQ658T7 463 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 OR1P1Q8NH06 330 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 FAM168AQ92567 244 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 EAF1Q96JC9 268 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-203ENST00000381209 TBX15Q96SF7 602 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 NIPSNAP3BQ9BS92 247 aa13.8□□□□□ -0.2
RPAIN-203ENST00000381209 C19orf24Q9BVV8 132 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms