RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 C9orf153Q5TBE3 101 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 PRR33A8MZF0 331 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 AHRRA9YTQ3 701 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 IGHG3P01860 377 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 GPX4P36969 197 aaPredicted RBP11.28□□□□□ -0.6
HIPK3-202ENST00000379016 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM30AQ9NV96 361 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 ERCC8Q13216 396 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 SAMD5Q5TGI4 173 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.6
HIPK3-202ENST00000379016 APCDD1LQ8NCL9 501 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 WDFY2Q96P53 400 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 MYOFQ9NZM1 2061 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 UBR2Q8IWV8 1755 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 HIGD1CA8MV81 97 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 FMC1Q96HJ9 113 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 Q9H3A6 140 aa11.27□□□□□ -0.6
HIPK3-202ENST00000379016 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 RSPO3Q9BXY4 272 aaPredicted RBP11.27□□□□□ -0.61
HIPK3-202ENST00000379016 GLIPR1P48060 266 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 GGACTQ9BVM4 153 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
HIPK3-202ENST00000379016 TAL2Q16559 108 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 C1QL2Q7Z5L3 287 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 IGKCP01834 107 aa11.27□□□□□ -0.61
HIPK3-202ENST00000379016 OSR1Q8TAX0 266 aaPredicted RBP11.27□□□□□ -0.61
HIPK3-202ENST00000379016 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
HIPK3-202ENST00000379016 MMP23AO75900 390 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 HAMPP81172 84 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 SS18Q15532 418 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 NAA38Q9BRA0 125 aaKnown RBP11.26□□□□□ -0.61
HIPK3-202ENST00000379016 MED12Q93074 2177 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 KIF26BQ2KJY2 2108 aa11.26□□□□□ -0.61
HIPK3-202ENST00000379016 NPIPB13A6NJU9 1138 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 IFT172Q9UG01 1749 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 TGIF1Q15583 401 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 PLSCR4Q9NRQ2 329 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 PTP4A3O75365 173 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 HOXD4P09016 255 aaPredicted RBP11.25□□□□□ -0.61
HIPK3-202ENST00000379016 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 FCN3O75636 299 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
HIPK3-202ENST00000379016 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 MSGN1A6NI15 193 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 A8MXK9 166 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 IGFBP2P18065 325 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 APOBEC3AP31941 199 aaPredicted RBP11.25□□□□□ -0.61
HIPK3-202ENST00000379016 GNG5P63218 68 aa11.25□□□□□ -0.61
HIPK3-202ENST00000379016 OR5P3Q8WZ94 311 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 CTGFP29279 349 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 PDFQ9HBH1 243 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
HIPK3-202ENST00000379016 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
HIPK3-202ENST00000379016 P2RY6Q15077 328 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 LINC01555Q8NAE3 123 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 RGPD1P0DJD0 1748 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 FOXL1Q12952 345 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 KLF14Q8TD94 323 aaPredicted RBP11.24□□□□□ -0.61
HIPK3-202ENST00000379016 F5P12259 2224 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 CFHR3Q02985 330 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 C9orf62Q8N4C0 152 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 PLAC1Q9HBJ0 212 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 DLL3Q9NYJ7 618 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
HIPK3-202ENST00000379016 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 DTX1Q86Y01 620 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 SMDT1Q9H4I9 107 aa11.24□□□□□ -0.61
HIPK3-202ENST00000379016 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 CDKN1AP38936 164 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 RND3P61587 244 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 GDF15Q99988 308 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 LINC00518Q8N0U6 118 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 TMEM238C9JI98 176 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 EFEMP2O95967 443 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms