RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CYB561P49447 251 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 C1orf174Q8IYL3 243 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 GP6Q9HCN6 339 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 YLPM1P49750 1951 aaKnown RBP9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 TMEM30CPA0ZSE6 113 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 CGAP01215 116 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 TDGF1P13385 188 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 MAGEA5P43359 124 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 GABRA2P47869 451 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 FOXF2Q12947 444 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 RPEL1Q2QD12 228 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 TMEM186Q96B77 213 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 FCGR3BO75015 233 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 DUSP3P51452 185 aaPredicted RBP9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 SUMO1P63165 101 aaKnown RBP9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 Q6ZN92 141 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 OR13A1Q8NGR1 328 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 STARD4Q96DR4 205 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 SFXN3Q9BWM7 321 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 LOC400499M0QZD8 3231 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 WISP2O76076 250 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 OR5G3P0C626 314 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 EDN2P20800 178 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 EFNB3Q15768 340 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 SLC45A2Q9UMX9 530 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 LOXL2Q9Y4K0 774 aa9.5□□□□□ -0.89
TM9SF2-201ENST00000376387 ACTL6BO94805 426 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 OR4B1Q8NGF8 309 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 ZNF586Q9NXT0 402 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 CENPWQ5EE01 88 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 ZNF766Q5HY98 468 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 NIT1Q86X76 327 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 OR4P4Q8NGL7 312 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 TAAR6Q96RI8 345 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 POLDIP2Q9Y2S7 368 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 OOEPA6NGQ2 149 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 K7ESF4 209 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 ENSAO43768 121 aaKnown RBP9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 OR1C1Q15619 314 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 UTF1Q5T230 341 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 UNQ5815/PRO19632Q6UWF5 114 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
TM9SF2-201ENST00000376387 GFRA3O60609 400 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 MYOD1P15172 320 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 CRYBB3P26998 211 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 SRIP30626 198 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 VDAC2P45880 294 aaPredicted RBP9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 HINT1P49773 126 aaPredicted RBP9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 ZNF253O75346 499 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 LGALS7P47929 136 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 DCAF12Q5T6F0 453 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 Q8IYB0 196 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 STPG3Q8N7X2 389 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 KCNS1Q96KK3 526 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 PILRBQ9UKJ0 227 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
TM9SF2-201ENST00000376387 TRGV10A0A0A0MS01 117 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 BMPR1BO00238 502 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 NTF3P20783 257 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 TMPRSS3P57727 454 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 RPL39P5Q59GN2 51 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 MPV17P39210 176 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 MFAP4P55083 255 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 SLC25A40Q8TBP6 338 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 GMPPAQ96IJ6 420 aaPredicted RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 SRSF8Q9BRL6 282 aaKnown RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 MRPS17Q9Y2R5 130 aaKnown RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 TRIOBPQ9H2D6 2365 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 DUTP33316 252 aaKnown RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 SPEM1Q8N4L4 309 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 NHLRC2Q8NBF2 726 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 BOKQ9UMX3 212 aaPredicted RBP9.47□□□□□ -0.89
TM9SF2-201ENST00000376387 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms