RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 WDR73Q6P4I2 378 aa10.66□□□□□ -0.7
MSH5-204ENST00000375755 C11orf52Q96A22 123 aa10.66□□□□□ -0.7
MSH5-204ENST00000375755 GGTLC1Q9BX51 225 aa10.66□□□□□ -0.7
MSH5-204ENST00000375755 RNASE7Q9H1E1 156 aaKnown RBP10.66□□□□□ -0.7
MSH5-204ENST00000375755 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
MSH5-204ENST00000375755 IGF2RP11717 2491 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 CADP27708 2225 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 FOXH1O75593 365 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 GUSBP1Q15486 140 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 VAMP3Q15836 100 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 PDLIM3Q53GG5 364 aaPredicted RBP10.65□□□□□ -0.7
MSH5-204ENST00000375755 MRPL54Q6P161 138 aaKnown RBP10.65□□□□□ -0.7
MSH5-204ENST00000375755 C19orf35Q6ZS72 473 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 ZADH2Q8N4Q0 377 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 RBMXL3Q8N7X1 1067 aaKnown RBP10.65□□□□□ -0.7
MSH5-204ENST00000375755 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 DOLPP1Q86YN1 238 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 OR52L2PQ8NGH6 319 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 OR5B3Q8NH48 314 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 LY96Q9Y6Y9 160 aa10.65□□□□□ -0.7
MSH5-204ENST00000375755 GABRA6Q16445 453 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 PCNX1Q96RV3 2341 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 HES4Q9HCC6 221 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
MSH5-204ENST00000375755 CDC42EP3Q9UKI2 254 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 FZR1Q9UM11 496 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 ZGRF1Q86YA3 2104 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 TRAV30A0A087WSZ9 112 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 ANKRD30BLA7E2S9 258 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 IGLL1P15814 213 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 RELBQ01201 579 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 CATR1Q13166 79 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 MUC15Q8N387 334 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 RAC2P15153 192 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 RIPPLY3P57055 190 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 PNKDQ8N490 385 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 PKIBQ9C010 78 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
MSH5-204ENST00000375755 ICE1Q9Y2F5 2266 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 CACNA1DQ01668 2161 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 LINC00473A8K010 186 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 J3QT63 122 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 MPDU1O75352 247 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 RHOBP62745 196 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 OR4P4Q8NGL7 312 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 C1orf159Q96HA4 380 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 AMY1AP04745 511 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 GNG4P50150 75 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 Q56UQ5 140 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 EBLN2Q6P2I7 272 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 PQLC2Q6ZP29 291 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 Q6ZT83 130 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 SMIM15Q7Z3B0 74 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 CXorf67Q86X51 503 aaPredicted RBP10.63□□□□□ -0.71
MSH5-204ENST00000375755 NEUROG1Q92886 237 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 SARAFQ96BY9 339 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 SCNM1Q9BWG6 230 aa10.63□□□□□ -0.71
MSH5-204ENST00000375755 C12orf77C9JDV5 145 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 SMPD2O60906 423 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 CGAP01215 116 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 OR10J4P0C629 311 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 CEBPDP49716 269 aaPredicted RBP10.62□□□□□ -0.71
MSH5-204ENST00000375755 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 C18orf32Q8TCD1 76 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 MPC1Q9Y5U8 109 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 CDIPTO14735 213 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 GFRA3O60609 400 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 EFNB3Q15768 340 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 TNXAQ16473 311 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 WDR31Q8NA23 367 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 ZC2HC1AQ96GY0 325 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
MSH5-204ENST00000375755 PRSS46E5RG02 174 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 HLA-DQA1P01909 254 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 APCSP02743 223 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 CRYBB3P26998 211 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 MPV17P39210 176 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 SELENOVP59797 346 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
MSH5-204ENST00000375755 SLAQ13239 276 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 SLC25A40Q8TBP6 338 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 ZNF71Q9NQZ8 489 aaPredicted RBP10.61□□□□□ -0.71
MSH5-204ENST00000375755 HELTA6NFD8 242 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 H0YJW9 148 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 GOSR1O95249 250 aa10.61□□□□□ -0.71
MSH5-204ENST00000375755 PSG1P11464 419 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms