RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 OCC1Q8TAD7 63 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 C5orf30Q96GV9 206 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 LPAR2Q9HBW0 351 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 AURKAIP1Q9NWT8 199 aaPredicted RBP9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF586Q9NXT0 402 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 PKDREJQ9NTG1 2253 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 BAHCC1Q9P281 2608 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 TRAV39A0A0B4J263 110 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 IQCF6A8MYZ5 107 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 PRSS46E5RG02 174 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 SERF1AO75920 110 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 ADH4P08319 380 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 LINC00310P59036 64 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 HTD2P86397 168 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 WDR86Q86TI4 376 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 NUP37Q8NFH4 326 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 GGTLC1Q9BX51 225 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 PATZ1Q9HBE1 687 aaKnown RBP9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 SLC45A2Q9UMX9 530 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 ZFP30Q9Y2G7 519 aa9.4□□□□□ -0.9
TSPAN1-201ENST00000372003 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 VSTM5A8MXK1 200 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 IFNL4K9M1U5 179 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 HBZP02008 142 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 OR5G3P0C626 314 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 GCHFRP30047 84 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 GLRXP35754 106 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 COMPP49747 757 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 UBE2G2P60604 165 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 RHOBP62745 196 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 ADIPOQQ15848 244 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 CRYBG3Q68DQ2 2970 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 TCF23Q7RTU1 214 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 LRP11Q86VZ4 500 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 BAGE3Q86Y29 109 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 BAGE2Q86Y30 109 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 SLC25A40Q8TBP6 338 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 CORO2AQ92828 525 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 DERL1Q9BUN8 251 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 SAMD10Q9BYL1 202 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 SLC25A10Q9UBX3 287 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 PTPN13Q12923 2485 aa9.39□□□□□ -0.91
TSPAN1-201ENST00000372003 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 RBMXL2O75526 392 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 GPX1P07203 203 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 EGR1P18146 543 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 KIR2DS2P43631 304 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 EDDM3BP56851 147 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 RAB31Q13636 194 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 C1orf174Q8IYL3 243 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 MUC15Q8N387 334 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 OR52L2PQ8NGH6 319 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 EAF1Q96JC9 268 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 TUBG2Q9NRH3 451 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 OSTCQ9NRP0 149 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 FCN1O00602 326 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 CBLN1P23435 193 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 MPV17P39210 176 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 CTRLP40313 264 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 RTL8BQ17RB0 113 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 HLA-DRB5Q30154 266 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 C19orf35Q6ZS72 473 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 KLF14Q8TD94 323 aaPredicted RBP9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 MGST2Q99735 147 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 MSL2Q9HCI7 577 aa9.38□□□□□ -0.91
TSPAN1-201ENST00000372003 A0A1B0GUS0 222 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 C20orf202A1L168 122 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 PSPNO60542 156 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 ZNF253O75346 499 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 NPSP0C0P6 89 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 SELENOVP59797 346 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 ERVK-16P61578 105 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 RPL31P62899 125 aaKnown RBP9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 CX3CL1P78423 397 aa9.37□□□□□ -0.91
TSPAN1-201ENST00000372003 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms