RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SMN1Q16637 294 aaKnown RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 STX12Q86Y82 276 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 UBE2DNLQ8IWF7 75 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 PUSL1Q8N0Z8 303 aaKnown RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF485Q8NCK3 441 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 RHOXF1Q8NHV9 184 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 OSR1Q8TAX0 266 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 APH1BQ8WW43 257 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 MRPL48Q96GC5 212 aaKnown RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 C20orf24Q9BUV8 137 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 LPAR5Q9H1C0 372 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 MRPS18AQ9NVS2 196 aaKnown RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 SMPD3Q9NY59 655 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 CKLFQ9UBR5 152 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 CLEC2DQ9UHP7 191 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGHV3-21A0A0B4J1V1 117 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 LOC100130705A0A1B0GUX0 176 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGLC7A0M8Q6 106 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM14DPA8MWL7 114 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 FCGR3BO75015 233 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 SNAPC5O75971 98 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 PTTG1O95997 202 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 IFNA21P01568 189 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 IFNA17P01571 189 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGLV2-14P01704 120 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 APOA1P02647 267 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 RRASP10301 218 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 SRMP19623 302 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 PTBP1P26599 531 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 RCVRNP35243 200 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 XGP55808 180 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 DEFA1P59665 94 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 DEFA3P59666 94 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 DEFB131AP59861 70 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 PLAC9Q5JTB6 97 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 ZNF367Q7RTV3 350 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 ZNF555Q8NEP9 628 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM167AQ8TBQ9 72 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM80Q96HE8 168 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 CNBD2Q96M20 576 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 RHPN1-AS1Q9BWJ2 59 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM59Q9BXS4 323 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR51E2Q9H255 320 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 FGF20Q9NP95 211 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 PLEKHJ1Q9NW61 149 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 BABAM2Q9NXR7 383 aa6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 RBMX2Q9Y388 322 aaKnown RBP6.02□□□□□ -1.45
HMGB1P39-201ENST00000366304 TRBV6-7A0A0A0MS04 114 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 PNMA8CA0A1B0GUJ8 204 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 H3BMQ9 156 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 K7EMT4 169 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 FABP7O15540 132 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 MRPS14O60783 128 aaKnown RBP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 CCNKO75909 580 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 KBTBD11O94819 623 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 APOHP02749 345 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 HIST1H1BP16401 226 aaKnown RBP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 FUSP35637 526 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 PPP5CP53041 499 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR2B8PP59922 312 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 RNF212Q495C1 297 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 YIF1BQ5BJH7 314 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 C1orf100Q5SVJ3 147 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 Q5VSD8 79 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 LRRTM1Q86UE6 522 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 MAFIPQ8WZ33 124 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 ARHGAP5-AS1Q96IT6 56 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 CXorf58Q96LI9 332 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 C18orf15Q96N68 181 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR2A7Q96R45 310 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 GPHA2Q96T91 129 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 CABLES2Q9BTV7 478 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 RIMS4Q9H426 269 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 KCNK7Q9Y2U2 307 aa6.01□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGKV1D-8A0A087WSZ0 117 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 TRAV3A0A0B4J244 114 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGHV7-4-1A0A0J9YVY3 117 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 KNCNA6PVL3 124 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 NDUFA4O00483 81 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 WBP4O75554 376 aaKnown RBP6□□□□□ -1.45
HMGB1P39-201ENST00000366304 DEFA4P12838 97 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 CELP19835 753 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 HOXA1P49639 335 aaPredicted RBP6□□□□□ -1.45
HMGB1P39-201ENST00000366304 PLA2G7Q13093 441 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 EIF4EBP1Q13541 118 aaPredicted RBP6□□□□□ -1.45
HMGB1P39-201ENST00000366304 ARFRP1Q13795 201 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 TTC23Q5W5X9 447 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 MORN3Q6PF18 240 aaPredicted RBP6□□□□□ -1.45
HMGB1P39-201ENST00000366304 LYPD1Q8N2G4 141 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 C6orf223Q8N319 242 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 DHRSXQ8N5I4 330 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM116Q8NCL8 245 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR10W1Q8NGF6 305 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR4A4PQ8NGN8 299 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 LRRC20Q8TCA0 184 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 CYGBQ8WWM9 190 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 ADTRPQ96IZ2 230 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms