RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 SERTAD4Q9NUC0 356 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 APC2O95996 2303 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 HCFC1P51610 2035 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 TRAV3A0A0B4J244 114 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 RRHO14718 337 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 PDE6DO43924 150 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 YPEL3P61236 119 aaPredicted RBP13.33□□□□□ -0.28
IFT140-201ENST00000361339 RPL31P62899 125 aaKnown RBP13.33□□□□□ -0.28
IFT140-201ENST00000361339 DOLPP1Q86YN1 238 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 SLC45A2Q9UMX9 530 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 FAM215AQ9Y5M1 114 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 ARFGEF3Q5TH69 2177 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 CEP295Q9C0D2 2601 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 LOC105371242A0A075B767 164 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 FCGR3BO75015 233 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 SRIP30626 198 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 SMIM21Q3B7S5 101 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 Q56UQ5 140 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 MMD2Q8IY49 270 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 Q8N976 141 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 SNRNP40Q96DI7 357 aaKnown RBP13.32□□□□□ -0.28
IFT140-201ENST00000361339 ZC2HC1AQ96GY0 325 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 RNASE7Q9H1E1 156 aaKnown RBP13.32□□□□□ -0.28
IFT140-201ENST00000361339 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 KLF3P57682 345 aaPredicted RBP13.32□□□□□ -0.28
IFT140-201ENST00000361339 UBE2V1Q13404 147 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 ZNF738Q8NE65 137 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 DEFB108BQ8NET1 73 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 ZNRD1Q9P1U0 126 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 ACTL6BO94805 426 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 GNG12Q9UBI6 72 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
IFT140-201ENST00000361339 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
IFT140-201ENST00000361339 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 H2BFWTQ7Z2G1 175 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 GAL3ST2Q9H3Q3 398 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 YTHDF2Q9Y5A9 579 aaKnown RBP13.31□□□□□ -0.28
IFT140-201ENST00000361339 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 A0A1W2PS18 150 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 C17orf112F2Z3M2 114 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 FOXH1O75593 365 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 PDLIM3Q53GG5 364 aaPredicted RBP13.31□□□□□ -0.28
IFT140-201ENST00000361339 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
IFT140-201ENST00000361339 MYOD1P15172 320 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 ITLN1Q8WWA0 313 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.3□□□□□ -0.28
IFT140-201ENST00000361339 TET2Q6N021 2002 aaPredicted RBP13.3□□□□□ -0.28
IFT140-201ENST00000361339 RNF212BA8MTL3 300 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 LDLRAD2Q5SZI1 272 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 ZCCHC24Q8N2G6 241 aaKnown RBP13.3□□□□□ -0.28
IFT140-201ENST00000361339 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 BORCS7Q96B45 105 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 BET1LQ9NYM9 111 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 POLEQ07864 2286 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 TACC2O95359 2948 aa13.3□□□□□ -0.28
IFT140-201ENST00000361339 M0R1X1 148 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 TSPOP30536 169 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 CTRLP40313 264 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 CATR1Q13166 79 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
IFT140-201ENST00000361339 C1orf162Q8NEQ5 155 aaPredicted RBP13.29□□□□□ -0.28
IFT140-201ENST00000361339 PRR7Q8TB68 274 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 ZGRF1Q86YA3 2104 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 TMPRSS2O15393 492 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 CD1BP29016 333 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 RPEL1Q2QD12 228 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 TIMM8BQ9Y5J9 83 aaPredicted RBP13.29□□□□□ -0.28
IFT140-201ENST00000361339 MGST1P10620 155 aaKnown RBP13.29□□□□□ -0.28
IFT140-201ENST00000361339 CD99P14209 185 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 GPR12P47775 334 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 ORAOV1Q8WV07 137 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 GCM1Q9NP62 436 aa13.29□□□□□ -0.28
IFT140-201ENST00000361339 YLPM1P49750 1951 aaKnown RBP13.28□□□□□ -0.28
IFT140-201ENST00000361339 SRRM5B3KS81 715 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
IFT140-201ENST00000361339 MORN2Q502X0 79 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
IFT140-201ENST00000361339 TNCP24821 2201 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 CSMD1Q96PZ7 3565 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 A8MXE2 369 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 AHRRA9YTQ3 701 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 SH3BGRL2Q9UJC5 107 aa13.28□□□□□ -0.28
IFT140-201ENST00000361339 C15orf62A8K5M9 175 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 SPINT2O43291 252 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 LGALS4P56470 323 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 ZADH2Q8N4Q0 377 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 ZNF596Q8TC21 504 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 SSBP3Q9BWW4 388 aaPredicted RBP13.27□□□□□ -0.28
IFT140-201ENST00000361339 CLEC7AQ9BXN2 247 aa13.27□□□□□ -0.28
IFT140-201ENST00000361339 CDKN1BP46527 198 aa13.27□□□□□ -0.29
IFT140-201ENST00000361339 LOXL3P58215 753 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms