RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 Q6ZRM9 215 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 PIP4P1Q86T03 277 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 ZNF383Q8NA42 475 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 CACNG8Q8WXS5 425 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 GPR61Q9BZJ8 451 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
PPP1CB-202ENST00000358506 VENTXO95231 258 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 TRGC1P0CF51 173 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 LINC00473A8K010 186 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 FOXH1O75593 365 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 CD5P06127 495 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 PDLIM4P50479 330 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 CENPWQ5EE01 88 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 MIR17HGQ75NE6 70 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 FAM169BQ8N8A8 192 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 DPRXA6NFQ7 191 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 PIMREGQ9BSJ6 248 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 TMEM183BQ1AE95 376 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 SHANK1Q9Y566 2161 aa13.72□□□□□ -0.21
PPP1CB-202ENST00000358506 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 S4R3C0 116 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 ZGRF1Q86YA3 2104 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 SCO2A0A1W2PP80 73 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 IL4P05112 153 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 PF4V1P10720 104 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 COX6B1P14854 86 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 LOXL3P58215 753 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 HEPN1Q6WQI6 88 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 DPF1Q92782 380 aa13.71□□□□□ -0.21
PPP1CB-202ENST00000358506 TNFSF13O75888 250 aa13.71□□□□□ -0.22
PPP1CB-202ENST00000358506 MT-ND6P03923 174 aa13.71□□□□□ -0.22
PPP1CB-202ENST00000358506 WDR86Q86TI4 376 aa13.71□□□□□ -0.22
PPP1CB-202ENST00000358506 TMEM178BH3BS89 294 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 OR2J3O76001 311 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 Q6ZR03 302 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 BMPR1BO00238 502 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 PRCDQ00LT1 54 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 OR1P1Q8NH06 330 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 MBD3L1Q8WWY6 194 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
PPP1CB-202ENST00000358506 NBEAP1P0C6P0 100 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 ANOS1P23352 680 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 HOXA4Q00056 320 aaPredicted RBP13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 LY6EQ16553 131 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 IGFL3Q6UXB1 125 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 TMEM14EPQ6UXP3 125 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 ZNF585BQ52M93 769 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 NUP37Q8NFH4 326 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 MRPL18Q9H0U6 180 aaKnown RBP13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 TRAV3A0A0B4J244 114 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 WT1P19544 449 aaPredicted RBP13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 OR52E5Q8NH55 327 aa13.69□□□□□ -0.22
PPP1CB-202ENST00000358506 GAFA1Q96PS6 74 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 OR5AL1P0C617 328 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 CD24P25063 80 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 TMEM177Q53S58 311 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 A0A087X0M5 115 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 A0A1B0GX30 115 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 PRR30Q53SZ7 412 aaPredicted RBP13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 OR10W1Q8NGF6 305 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 A0A087WWC5 75 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 RPL23P62829 140 aaKnown RBP13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 GOLT1AQ6ZVE7 132 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 WFDC3Q8IUB2 231 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 MED13Q9UHV7 2174 aa13.68□□□□□ -0.22
PPP1CB-202ENST00000358506 GPX4P36969 197 aaPredicted RBP13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 CCL19Q99731 98 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 FREM1Q5H8C1 2179 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 TEX50A0A1B0GTY4 177 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 C1QTNF9BB2RNN3 333 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 F5H697 171 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 NHLH1Q02575 133 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 CD69Q07108 199 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 ELOBQ15370 118 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
PPP1CB-202ENST00000358506 PPP1R27Q86WC6 154 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms