RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 STRADBQ9C0K7 418 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 METRNQ9UJH8 293 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 A0A1W2PS18 150 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 PMS2P5A8MQ11 134 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 SNURFLB1AK76 121 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 RRHO14718 337 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR9G9P0C7N8 305 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 NTF3P20783 257 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 CRYBA4P53673 196 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 TCL1AP56279 114 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 PSG3Q16557 428 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 GTSF1LQ9H1H1 148 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 CADP27708 2225 aa6.84□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 NPIPB11E5RHQ5 1161 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CLDN14O95500 239 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CA2P00918 260 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 RAB9AP51151 201 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZNF83P51522 516 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 RPL31P62899 125 aaKnown RBP6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 BVES-AS1Q5T3Y7 98 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 PMS2CLQ68D20 193 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 Q8IYB0 196 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR13A1Q8NGR1 328 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CLEC7AQ9BXN2 247 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 GCM1Q9NP62 436 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 MBNL3Q9NUK0 354 aaKnown RBP6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CD5LO43866 347 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 AGFG2O95081 481 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 REG1AP05451 166 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CEACAM3P40198 252 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 GPR6P46095 362 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 GPR12P47775 334 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 HTD2P86397 168 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 PSG7Q13046 419 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 Q6ZR03 302 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 BHLHA15Q7RTS1 189 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 FAM19A2Q8N3H0 131 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 GMPPAQ96IJ6 420 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 CHRDL1Q9BU40 450 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 MS4A5Q9H3V2 200 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 BOD1L1Q8NFC6 3051 aa6.83□□□□□ -1.32
CDC42SE1-201ENST00000357235 OOEPA6NGQ2 149 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 MPV17P39210 176 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 SELENOVP59797 346 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 Q56UQ5 140 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 CNEP1R1Q8N9A8 125 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR4P4Q8NGL7 312 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 LEAP2Q969E1 77 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRAV9-1A0A075B6T8 112 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 DLL1O00548 723 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 NTN3O00634 580 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TMPRSS2O15393 492 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 CKS1BP61024 79 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 FXYD3Q14802 87 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZNF146Q15072 292 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 RPL39P5Q59GN2 51 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 OR10J3Q5JRS4 329 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 ASPHD1Q5U4P2 390 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 SPATA31B1PQ5VZV4 182 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 COQ2Q96H96 371 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 AP1S3Q96PC3 154 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TAAR6Q96RI8 345 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 KCNIP2Q9NS61 270 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 SERTAD4Q9NUC0 356 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 NAT8BQ9UHF3 227 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 ROS1P08922 2347 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 PPIAL4EA0A075B759 164 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TRAV3A0A0B4J244 114 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 PPIAL4CA0A0B4J2A2 164 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TIMM8AO60220 97 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 SS18L1O75177 396 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 FOXH1O75593 365 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 PPIAL4FP0DN26 164 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TIMP3P35625 211 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 MEOX1P50221 254 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 NEUROG1Q92886 237 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 ST6GALNAC6Q969X2 333 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 ZC2HC1AQ96GY0 325 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 RCHY1Q96PM5 261 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 WDR83OSQ9Y284 106 aa6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 YTHDF2Q9Y5A9 579 aaKnown RBP6.82□□□□□ -1.32
CDC42SE1-201ENST00000357235 CFAP47Q6ZTR5 3102 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 CEP250Q9BV73 2442 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 PLP1P60201 277 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 ERVK11-1P61568 191 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 ERVK-16P61578 105 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 FOXF2Q12947 444 aa6.81□□□□□ -1.32
CDC42SE1-201ENST00000357235 DOLPP1Q86YN1 238 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms