RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 OR10P1Q8NGE3 313 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 OR2D3Q8NGH3 330 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 GAFA1Q96PS6 74 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 ZNF586Q9NXT0 402 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 SAA2-SAA4A0A096LPE2 208 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 K7EP13 123 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 TCF21O43680 179 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 CLDN1O95832 211 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 CTRLP40313 264 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 COMPP49747 757 aaPredicted RBP15.31■□□□□ 0.04
SPNS1-204ENST00000352260 GNG10P50151 68 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 EDDM3BP56851 147 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 EIF4EBP1Q13541 118 aaPredicted RBP15.31■□□□□ 0.04
SPNS1-204ENST00000352260 TEX36Q5VZQ5 186 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 LEMD1Q68G75 181 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 ZNF843Q8N446 348 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 ZNF808Q8N4W9 903 aaPredicted RBP15.31■□□□□ 0.04
SPNS1-204ENST00000352260 LINC01560Q8TB33 94 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 GATAD1Q8WUU5 269 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 C22orf15Q8WYQ4 148 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 NPCDR1Q9BY65 106 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 PATZ1Q9HBE1 687 aaKnown RBP15.31■□□□□ 0.04
SPNS1-204ENST00000352260 LY96Q9Y6Y9 160 aa15.31■□□□□ 0.04
SPNS1-204ENST00000352260 POLEQ07864 2286 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 PMS2P5A8MQ11 134 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 SERF1AO75920 110 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 LINC00310P59036 64 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 LTC4SQ16873 150 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 OR8G2PQ6IF36 304 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 OR10G8Q8NGN5 311 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 TMEM204Q9BSN7 226 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 NCOR1P1Q9H4R4 102 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 CACNA1DQ01668 2161 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 ICE1Q9Y2F5 2266 aa15.3■□□□□ 0.04
SPNS1-204ENST00000352260 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.29■□□□□ 0.04
SPNS1-204ENST00000352260 DEFB108AA8MXU0 73 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 GRNP28799 593 aaKnown RBP15.29■□□□□ 0.04
SPNS1-204ENST00000352260 CDKN1BP46527 198 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 IZUMO4Q1ZYL8 232 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 VN1R17PQ8TDU5 208 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 CCL13Q99616 98 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 IL36BQ9NZH7 164 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 RELNP78509 3460 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 CD3EP07766 207 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
SPNS1-204ENST00000352260 TDRG1Q3Y452 100 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 ZNF788Q6ZQV5 615 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 KLHDC1Q8N7A1 406 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 SIGLECL1Q8N7X8 197 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 SAMD10Q9BYL1 202 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 MRPL18Q9H0U6 180 aaKnown RBP15.29■□□□□ 0.04
SPNS1-204ENST00000352260 JPT1Q9UK76 154 aa15.29■□□□□ 0.04
SPNS1-204ENST00000352260 A0A1B0GUS0 222 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 NKX6-3A6NJ46 265 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 LRRC30A6NM36 301 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 TOMM40O96008 361 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 MT-ND6P03923 174 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 RBX1P62877 108 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 SUMO1P63165 101 aaKnown RBP15.28■□□□□ 0.04
SPNS1-204ENST00000352260 CDSNQ15517 529 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 BATFQ16520 125 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 SAP30LQ9HAJ7 183 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 PSG11Q9UQ72 335 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 DYSFO75923 2080 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 DSCAMO60469 2012 aa15.28■□□□□ 0.04
SPNS1-204ENST00000352260 RAI1Q7Z5J4 1906 aaPredicted RBP15.28■□□□□ 0.04
SPNS1-204ENST00000352260 COL6A6A6NMZ7 2263 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 F2RL2O00254 374 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 HMGB3O15347 200 aaKnown RBP15.27■□□□□ 0.04
SPNS1-204ENST00000352260 CGB3P0DN86 165 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 CGB7P0DN87 165 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 FGFRL1Q8N441 504 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 FAM216BQ8N7L0 139 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 FAM234AQ9H0X4 552 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 CALYQ9NYX4 217 aa15.27■□□□□ 0.04
SPNS1-204ENST00000352260 NDUFB4O95168 129 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 PLAUP00749 431 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 P0C879 139 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 CDKN1AP38936 164 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 MORN2Q502X0 79 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 BAGE3Q86Y29 109 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 BAGE2Q86Y30 109 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 GNB1LQ9BYB4 327 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 DYNLRB1Q9NP97 96 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.27■□□□□ 0.03
SPNS1-204ENST00000352260 GNG12Q9UBI6 72 aa15.27■□□□□ 0.03
SPNS1-204ENST00000352260 GRIFINA4D1Z8 144 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 MPDU1O75352 247 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 GPX1P07203 203 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 APOBEC3AP31941 199 aaPredicted RBP15.26■□□□□ 0.03
SPNS1-204ENST00000352260 LOXL3P58215 753 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 ZNF90Q03938 601 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 CATR1Q13166 79 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 C17orf58Q2M2W7 97 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 TCTEX1D1Q8N7M0 179 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 OR5T1Q8NG75 326 aa15.26■□□□□ 0.03
SPNS1-204ENST00000352260 DIRC3C9JPN6 131 aa15.25■□□□□ 0.03
SPNS1-204ENST00000352260 EFNB3Q15768 340 aa15.25■□□□□ 0.03
SPNS1-204ENST00000352260 WDR73Q6P4I2 378 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms