RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HRH4Q9H3N8 390 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 IGLC7A0M8Q6 106 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 RNF223E7ERA6 249 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 C17orf112F2Z3M2 114 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 FCN1O00602 326 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 ZNF709Q8N972 641 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 SRSF8Q9BRL6 282 aaKnown RBP17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 NPVFQ9HCQ7 196 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 DOPEY2Q9Y3R5 2298 aa17.13■□□□□ 0.33
TSPAN3-202ENST00000346495 TACC2O95359 2948 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 IGHV3OR16-10A0A075B7F0 116 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 ZNF616Q08AN1 781 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 FBLN7Q53RD9 439 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 IL34Q6ZMJ4 242 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 LYPD6BQ8NI32 183 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 SRSF12Q8WXF0 261 aaKnown RBP17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 NPCDR1Q9BY65 106 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 C1RLQ9NZP8 487 aa17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 ANKRD17O75179 2603 aaKnown RBP17.12■□□□□ 0.33
TSPAN3-202ENST00000346495 J3QLI3 93 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 CNIH1O95406 144 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 FHITP49789 147 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 SSBP2P81877 361 aaPredicted RBP17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 TREML4Q6UXN2 200 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 ZNF114Q8NC26 417 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 RNASEH2CQ8TDP1 164 aaKnown RBP17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 P2RX4Q99571 388 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 TENM4Q6N022 2769 aa17.11■□□□□ 0.33
TSPAN3-202ENST00000346495 RAB19A4D1S5 217 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 ANKRD34BA5PLL1 514 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 NCBP2LA6PVI3 153 aaKnown RBP17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 TEX22C9J3V5 150 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 ARSJQ5FYB0 599 aaPredicted RBP17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 FAM120AOSQ5T036 256 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 IGHV4-38-2P0DP08 117 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 GPX4P36969 197 aaPredicted RBP17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 BRD3OSQ6XYD6 125 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 CACNG8Q8WXS5 425 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 Q96MF0 132 aa17.1■□□□□ 0.33
TSPAN3-202ENST00000346495 SOX15O60248 233 aa17.09■□□□□ 0.33
TSPAN3-202ENST00000346495 TSPAN15O95858 294 aa17.09■□□□□ 0.33
TSPAN3-202ENST00000346495 CD69Q07108 199 aa17.09■□□□□ 0.33
TSPAN3-202ENST00000346495 TMEM41BQ5BJD5 291 aa17.09■□□□□ 0.33
TSPAN3-202ENST00000346495 MEGF9Q9H1U4 602 aa17.09■□□□□ 0.33
TSPAN3-202ENST00000346495 I3L521 148 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 MBP02144 154 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 REG1AP05451 166 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 AREGP15514 252 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 AKR1C1Q04828 323 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 FXYD3Q14802 87 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 TEPPQ6URK8 271 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 KRTAP1-3Q8IUG1 177 aa17.08■□□□□ 0.32
TSPAN3-202ENST00000346495 TGFAP01135 160 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 IGHV4-31P0DP07 118 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 PVRIGQ6DKI7 326 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 UQCC3Q6UW78 93 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 ZNF562Q6V9R5 426 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 COMMD1Q8N668 190 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 MAPK1IP1LQ8NDC0 245 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 SSMEM1Q8WWF3 244 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 KCNIP2Q9NS61 270 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 RPRMQ9NS64 109 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 LSM4Q9Y4Z0 139 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 ASH1LQ9NR48 2969 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 A0A0U1RQK1 487 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 H2AFB1P0C5Y9 115 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 RAB31Q13636 194 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 TMEM249Q2WGJ8 235 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 FFAR4Q5NUL3 377 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 TMEM144Q7Z5S9 345 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 Q8N9W7 124 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 OR1P1Q8NH06 330 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 ABHD5Q8WTS1 349 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 MGST2Q99735 147 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 VSIRQ9H7M9 311 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 FAM96BQ9Y3D0 163 aa17.07■□□□□ 0.32
TSPAN3-202ENST00000346495 CR1P17927 2039 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 CELSR2Q9HCU4 2923 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 PLXNB1O43157 2135 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 AVPP01185 164 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 OPRK1P41145 380 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 KLF17Q5JT82 389 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 ACSM6Q6P461 480 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 SLC16A13Q7RTY0 426 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 LFNGQ8NES3 379 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 SLC35E1Q96K37 410 aa17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 F11RQ9Y624 299 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-202ENST00000346495 CORTO00230 105 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 APELAP0DMC3 54 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 RAB2AP61019 212 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 GAMTQ14353 236 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 RASL11BQ9BPW5 248 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 GGTLC1Q9BX51 225 aa17.05■□□□□ 0.32
TSPAN3-202ENST00000346495 BTBD17A6NE02 478 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 TSPAN9O75954 239 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 HBE1P02100 147 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 FBP1P09467 338 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 CX3CL1P78423 397 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 TOR2AQ5JU69 321 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms