RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 UBE2V1Q13404 147 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 SLC25A45Q8N413 288 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 OR13A1Q8NGR1 328 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 KIR2DL4Q99706 377 aa14.69□□□□□ -0.06
SPAST-202ENST00000345662 ZNF703Q9H7S9 590 aaPredicted RBP14.69□□□□□ -0.06
SPAST-202ENST00000345662 LINC00271P0C7V0 271 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 CTSSP25774 331 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 PRSS8Q16651 343 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 CIARTQ8N365 385 aaPredicted RBP14.68□□□□□ -0.06
SPAST-202ENST00000345662 C10orf126Q8N4M7 172 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 CHCHD1Q96BP2 118 aaKnown RBP14.68□□□□□ -0.06
SPAST-202ENST00000345662 RAB9AP51151 201 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 AGMATQ9BSE5 352 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 MYOFQ9NZM1 2061 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 SFTPCP11686 197 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 CIRBPQ14011 172 aaKnown RBP14.68□□□□□ -0.06
SPAST-202ENST00000345662 ZNRF1Q8ND25 227 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 POLR2AP24928 1970 aaKnown RBP14.68□□□□□ -0.06
SPAST-202ENST00000345662 PRR33A8MZF0 331 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 LOXL3P58215 753 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 MS4A6AQ9H2W1 248 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 SEMA5BQ9P283 1151 aa14.68□□□□□ -0.06
SPAST-202ENST00000345662 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 ZNF837Q96EG3 531 aaPredicted RBP14.67□□□□□ -0.06
SPAST-202ENST00000345662 DEPPQ9NTK1 212 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 WDR82Q6UXN9 313 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 NUDT10Q8NFP7 164 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 PLPPR1Q8TBJ4 325 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 COPS9Q8WXC6 57 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 NYNRINQ9P2P1 1898 aaKnown RBP14.67□□□□□ -0.06
SPAST-202ENST00000345662 TSPOP30536 169 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 SVILO95425 2214 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 ZNF441Q8N8Z8 693 aa14.67□□□□□ -0.06
SPAST-202ENST00000345662 TRAV24A0A0B4J272 114 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 GCSAMLQ5JQS6 135 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 TEX45Q8NA69 505 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 A0A1W2PQM1 296 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 FOXI3A8MTJ6 420 aaPredicted RBP14.66□□□□□ -0.06
SPAST-202ENST00000345662 TMEM50AO95807 157 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 EFNB3Q15768 340 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 TMEM170BQ5T4T1 132 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 A0A1W2PS18 150 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 SS18L1O75177 396 aaPredicted RBP14.66□□□□□ -0.06
SPAST-202ENST00000345662 HSD52Q0P140 79 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 C1orf210Q8IVY1 113 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 RPP25LQ8N5L8 163 aaKnown RBP14.66□□□□□ -0.06
SPAST-202ENST00000345662 APOMO95445 188 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 DNM1P46Q6ZS02 220 aa14.66□□□□□ -0.06
SPAST-202ENST00000345662 ASXL3Q9C0F0 2248 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 C9JQL5 133 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 PAPPA-AS1Q5QFB9 102 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 RNASEH2CQ8TDP1 164 aaKnown RBP14.65□□□□□ -0.06
SPAST-202ENST00000345662 Q9H3A6 140 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 TRIP6Q15654 476 aaKnown RBP14.65□□□□□ -0.06
SPAST-202ENST00000345662 RFNGQ9Y644 331 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 RAMP3O60896 148 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 SCGB3A1Q96QR1 104 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 HEATR5BQ9P2D3 2071 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 FAM181BA6NEQ2 426 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 HBDP02042 147 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 KLRB1Q12918 225 aa14.65□□□□□ -0.06
SPAST-202ENST00000345662 C19orf54Q5BKX5 351 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 ATP5L2Q7Z4Y8 100 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 AHRRA9YTQ3 701 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 TSKUQ8WUA8 353 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 A0A0G2JMZ2 1700 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 LRRC37A2A6NM11 1700 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 NMSQ5H8A3 153 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 DOCK4Q8N1I0 1966 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 PATJQ8NI35 1801 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 MUC21A0A0G2JKD1 596 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 MUC21A0A140T8X8 626 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 MUC21Q5SSG8 566 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 FADS6Q8N9I5 356 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 TMEM171Q8WVE6 324 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 ICE1Q9Y2F5 2266 aa14.64□□□□□ -0.07
SPAST-202ENST00000345662 WBP1Q96G27 269 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 PATE3B3GLJ2 98 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 CDX4O14627 284 aaPredicted RBP14.63□□□□□ -0.07
SPAST-202ENST00000345662 SRSF7Q16629 238 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPAST-202ENST00000345662 EBLN2Q6P2I7 272 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 FER1L6-AS1Q8NA97 138 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 CFHR5Q9BXR6 569 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 EPDR1Q9UM22 224 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 SNRNP200O75643 2136 aaKnown RBP14.63□□□□□ -0.07
SPAST-202ENST00000345662 GPX1P07203 203 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 GNG5P63218 68 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 DEFB124Q8NES8 71 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 RALGAPA2Q2PPJ7 1873 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 CHD5Q8TDI0 1954 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 C9JCJ5 164 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.63□□□□□ -0.07
SPAST-202ENST00000345662 FAM106CPP0CH98 169 aa14.63□□□□□ -0.07
SPAST-202ENST00000345662 NRXN2Q9P2S2 1712 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 C15orf61A6NNL5 157 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 C3orf79P0CE67 100 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 C1orf185Q5T7R7 199 aa14.62□□□□□ -0.07
SPAST-202ENST00000345662 SAMD5Q5TGI4 173 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms