RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TMEM186Q96B77 213 aa13.93□□□□□ -0.18
PTCH1-201ENST00000331920 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-201ENST00000331920 C19orf24Q9BVV8 132 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 COLCA1Q6ZS62 124 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 SIRT4Q9Y6E7 314 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-201ENST00000331920 MED12Q93074 2177 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 PLA2G10O15496 165 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 DTX4Q9Y2E6 619 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
PTCH1-201ENST00000331920 AHRRA9YTQ3 701 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 P2RY6Q15077 328 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 CD300EQ496F6 205 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-201ENST00000331920 SPTA1P02549 2419 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 PRB1P04280 392 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTCH1-201ENST00000331920 TIMM23BQ5SRD1 257 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 NDUFS5O43920 106 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 SAMD5Q5TGI4 173 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
PTCH1-201ENST00000331920 BTAF1O14981 1849 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 GAGE13Q4V321 117 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 ZNF721Q8TF20 911 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 RPL35AP18077 110 aaKnown RBP13.91□□□□□ -0.18
PTCH1-201ENST00000331920 CCL1P22362 96 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 FXYD7P58549 80 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 SRSF7Q16629 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTCH1-201ENST00000331920 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 GAGE2AQ6NT46 116 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 YBX2Q9Y2T7 364 aaKnown RBP13.91□□□□□ -0.18
PTCH1-201ENST00000331920 ZNF407Q9C0G0 2248 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 CRYBA2P53672 197 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 KIAA0040Q15053 153 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 ZNF660Q6AZW8 331 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-201ENST00000331920 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 DOCK1Q14185 1865 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
PTCH1-201ENST00000331920 IFNL4K9M1U5 179 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 IGHV1-45A0A0A0MS14 117 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 IGHV3-53P01767 116 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 A0A1W2PPC1 479 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 MRPL52Q86TS9 123 aaKnown RBP13.9□□□□□ -0.18
PTCH1-201ENST00000331920 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.18
PTCH1-201ENST00000331920 MGST2Q99735 147 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 CD24P25063 80 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
PTCH1-201ENST00000331920 IGKCP01834 107 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 GATA2P23769 480 aaPredicted RBP13.9□□□□□ -0.18
PTCH1-201ENST00000331920 FAM27BQ5VT28 67 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 OR52E5Q8NH55 327 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 FAM57AQ8TBR7 257 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 DYSFO75923 2080 aa13.9□□□□□ -0.18
PTCH1-201ENST00000331920 LHBP01229 141 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 TMEM91Q6ZNR0 172 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 PRADC1Q9BSG0 188 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 SFXN3Q9BWM7 321 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 C21orf62Q9NYP8 219 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 HMGA2P52926 109 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 C2orf68Q2NKX9 166 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 GDF15Q99988 308 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 ZDBF2Q9HCK1 2354 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 TRAV8-3A0A0A6YYJ7 113 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 WDYHV1Q96HA8 205 aa13.89□□□□□ -0.19
PTCH1-201ENST00000331920 PTP4A3O75365 173 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 JPT1Q9UK76 154 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 HS3ST3B1Q9Y662 390 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 VENTXO95231 258 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 DANCRP0C864 163 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 MORN3Q6PF18 240 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-201ENST00000331920 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 ADMP35318 185 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 DRAM1Q8N682 238 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 C5orf66Q9H5L9 145 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 SPTBN1Q01082 2364 aaKnown RBP13.88□□□□□ -0.19
PTCH1-201ENST00000331920 MSGN1A6NI15 193 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 CGB3P0DN86 165 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 ATP5G3P48201 142 aa13.88□□□□□ -0.19
PTCH1-201ENST00000331920 CD5LO43866 347 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 PTGDSP41222 190 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 FOXL1Q12952 345 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 SMIM8Q96KF7 97 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 CASP8AP2Q9UKL3 1982 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 ZIC1Q15915 447 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 HEATR5AQ86XA9 2040 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 LILRA1O75019 489 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 IGKV1D-16P01601 117 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 RSPO4Q2I0M5 234 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-201ENST00000331920 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 C2orf82Q6UX34 121 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 ZNF703Q9H7S9 590 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-201ENST00000331920 ERVK11-1P61568 191 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 CENPVL1A0A0U1RR11 272 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 CA7P43166 264 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 FAM201AQ5SY85 155 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 TMEM54Q969K7 222 aa13.87□□□□□ -0.19
PTCH1-201ENST00000331920 C5orf47Q569G3 176 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
PTCH1-201ENST00000331920 CISD3P0C7P0 127 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms