RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 Q0VG73 95 aa18.4■□□□□ 0.54
HOXD1-201ENST00000331462 CENPWQ5EE01 88 aa18.4■□□□□ 0.54
HOXD1-201ENST00000331462 OR1L6Q8NGR2 347 aa18.4■□□□□ 0.54
HOXD1-201ENST00000331462 LRFN3Q9BTN0 628 aa18.4■□□□□ 0.54
HOXD1-201ENST00000331462 SRRM4A7MD48 611 aaKnown RBP18.39■□□□□ 0.53
HOXD1-201ENST00000331462 MMP23AO75900 390 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 IGKV1-16P04430 117 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 TPPP2P59282 170 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 ERVFC1-1P60608 527 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 IGFL3Q6UXB1 125 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 ZNF833PQ6ZTB9 187 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 DEFB124Q8NES8 71 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 GNB1LQ9BYB4 327 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 OSTCQ9NRP0 149 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 GRIFINA4D1Z8 144 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 HELTA6NFD8 242 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 ACTL6BO94805 426 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 RNF224P0DH78 156 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 RNASE2P10153 161 aaKnown RBP18.39■□□□□ 0.53
HOXD1-201ENST00000331462 CRISP2P16562 243 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 NDUFB7P17568 137 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 TAS2R45P59539 299 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 C1orf185Q5T7R7 199 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 ALKBH2Q6NS38 261 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 FAM216BQ8N7L0 139 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 CCL13Q99616 98 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 COL25A1Q9BXS0 654 aaPredicted RBP18.39■□□□□ 0.53
HOXD1-201ENST00000331462 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
HOXD1-201ENST00000331462 INS-IGF2F8WCM5 200 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 TNFSF4P23510 183 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 COL8A2P25067 703 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 RANP62826 216 aaKnown RBP18.38■□□□□ 0.53
HOXD1-201ENST00000331462 KRTCAP3Q53RY4 240 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 OSR1Q8TAX0 266 aaPredicted RBP18.38■□□□□ 0.53
HOXD1-201ENST00000331462 TMEM106BQ9NUM4 274 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 LINC00312Q9Y6C7 94 aa18.38■□□□□ 0.53
HOXD1-201ENST00000331462 RAI1Q7Z5J4 1906 aaPredicted RBP18.37■□□□□ 0.53
HOXD1-201ENST00000331462 SPAARA0A1B0GVQ0 90 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 A0A1W2PRE2 83 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 hADV38S2A0JD32 116 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 CD69Q07108 199 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 MRPL32Q9BYC8 188 aaKnown RBP18.37■□□□□ 0.53
HOXD1-201ENST00000331462 MT-ND6P03923 174 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 SAA1P0DJI8 122 aaPredicted RBP18.37■□□□□ 0.53
HOXD1-201ENST00000331462 CRYBB3P26998 211 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 RPL19P84098 196 aaKnown RBP18.37■□□□□ 0.53
HOXD1-201ENST00000331462 COX19Q49B96 90 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 MOB3BQ86TA1 216 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 CACNG8Q8WXS5 425 aa18.37■□□□□ 0.53
HOXD1-201ENST00000331462 PRRC2CQ9Y520 2896 aaKnown RBP18.36■□□□□ 0.53
HOXD1-201ENST00000331462 GGTLC3B5MD39 225 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 CX3CL1P78423 397 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 Q6ZWC4 215 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 RPRMLQ8N4K4 120 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 DEFB108BQ8NET1 73 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 FAM122AQ96E09 287 aa18.36■□□□□ 0.53
HOXD1-201ENST00000331462 FCN1O00602 326 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 ISLRO14498 428 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 SERF1AO75920 110 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 OR5I1Q13606 314 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 WDR73Q6P4I2 378 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 DMRTC2Q8IXT2 367 aaPredicted RBP18.35■□□□□ 0.53
HOXD1-201ENST00000331462 NUP37Q8NFH4 326 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 RNF2Q99496 336 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 PSMB11A5LHX3 300 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 EREGO14944 169 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 IER3P46695 156 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 USF2Q15853 346 aaPredicted RBP18.35■□□□□ 0.53
HOXD1-201ENST00000331462 TIGITQ495A1 244 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 IGF2BP2-AS1Q96M15 143 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 SLC25A33Q9BSK2 321 aa18.35■□□□□ 0.53
HOXD1-201ENST00000331462 SNURFLB1AK76 121 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 OR7C2O60412 319 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 C8orf88P0DMB2 117 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 IRF2P14316 349 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 CEACAM8P31997 349 aaPredicted RBP18.34■□□□□ 0.53
HOXD1-201ENST00000331462 MEF2CQ06413 473 aaPredicted RBP18.34■□□□□ 0.53
HOXD1-201ENST00000331462 TEX43Q6ZNM6 134 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 OR8I2Q8N0Y5 310 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 ZNF714Q96N38 554 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 GAL3ST2Q9H3Q3 398 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 NDUFA4L2Q9NRX3 87 aa18.34■□□□□ 0.53
HOXD1-201ENST00000331462 CD40P25942 277 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 PPOXP50336 477 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 TPTE2P1Q5T6R2 138 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 MRPL52Q86TS9 123 aaKnown RBP18.33■□□□□ 0.53
HOXD1-201ENST00000331462 OR9G1Q8NH87 305 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 TBX15Q96SF7 602 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 CADP27708 2225 aa18.33■□□□□ 0.53
HOXD1-201ENST00000331462 NKX6-3A6NJ46 265 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 DLL1O00548 723 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 IGLV2-8P01709 118 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 TMEM177Q53S58 311 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 Q6ZS92 163 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 ST6GALNAC3Q8NDV1 305 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 OR5AN1Q8NGI8 311 aa18.33■□□□□ 0.52
HOXD1-201ENST00000331462 APOA2P02652 100 aa18.32■□□□□ 0.52
HOXD1-201ENST00000331462 NUTF2P61970 127 aaKnown RBP18.32■□□□□ 0.52
HOXD1-201ENST00000331462 FAM167A-AS1Q96KT0 104 aa18.32■□□□□ 0.52
HOXD1-201ENST00000331462 C20orf144Q9BQM9 153 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms