RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SPTBN4Q9H254 2564 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 A0A1B0GX78 115 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 CER1O95813 267 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 HBZP02008 142 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 GJC3Q8NFK1 279 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 C18orf15Q96N68 181 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 C1RLQ9NZP8 487 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 OR2W1Q9Y3N9 320 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 RPS16P62249 146 aaKnown RBP9.84□□□□□ -0.83
SHMT2-201ENST00000328923 CCL7P80098 99 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 CCL28Q9NRJ3 127 aa9.84□□□□□ -0.83
SHMT2-201ENST00000328923 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
SHMT2-201ENST00000328923 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 LILRA5A6NI73 299 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 SPRY1O43609 319 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 PDCD6O75340 191 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 KLF7O75840 302 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 DEFB133Q30KQ1 61 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 FOXL2NBQ6ZUU3 175 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 C17orf82Q86X59 251 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 OXGR1Q96P68 337 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 SPXQ9BT56 116 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 C19orf25Q9UFG5 118 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 PTPRZ1P23471 2315 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 H3BMH7 237 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 NKX2-8O15522 239 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 NXPH1P58417 271 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 RPL31P62899 125 aaKnown RBP9.83□□□□□ -0.84
SHMT2-201ENST00000328923 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 PIGYQ3MUY2 71 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 DTX1Q86Y01 620 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 RNF138Q8WVD3 245 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 RAB1CQ92928 201 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 VGLL1Q99990 258 aa9.83□□□□□ -0.84
SHMT2-201ENST00000328923 H3BML4 177 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 VDAC2P45880 294 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF562Q6V9R5 426 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 OSR2Q8N2R0 312 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 OR51H1Q8NH63 302 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 NPCDR1Q9BY65 106 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 CDIP1Q9H305 208 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 OR1A1Q9P1Q5 309 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 IGHV1-24A0A0C4DH33 117 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 CD300LBA8K4G0 201 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 LMO7DNF2Z398 122 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 H0Y980 276 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 FGF6P10767 208 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 PSG2P11465 335 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 GFERP55789 205 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 TCF15Q12870 199 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 MALLQ13021 153 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 C10orf128Q5T292 105 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 TMEM116Q8NCL8 245 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 YTHDF2Q9Y5A9 579 aaKnown RBP9.82□□□□□ -0.84
SHMT2-201ENST00000328923 LINC00312Q9Y6C7 94 aa9.82□□□□□ -0.84
SHMT2-201ENST00000328923 F5H5K5 113 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 M0R135 149 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 SP9P0CG40 484 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-201ENST00000328923 RSPO4Q2I0M5 234 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 TIMM23BQ5SRD1 257 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 GDF5OSQ5U4N7 250 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 TTC9CQ8N5M4 171 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ZNF799Q96GE5 643 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 GRAMD2BQ96HH9 432 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 FAM186AA6NE01 2351 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 RP1P56715 2156 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 IGHV5-51A0A0C4DH38 117 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 M0QXV9 152 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 EFNA2O43921 213 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 PGLYRP1O75594 196 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-201ENST00000328923 IGHV3-7P01780 117 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ARL4DP49703 201 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 TCTAP57738 103 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ASPHD1Q5U4P2 390 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 FAM69BQ5VUD6 431 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 CARD17Q5XLA6 110 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 OSR1Q8TAX0 266 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-201ENST00000328923 LRRC29Q8WV35 223 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 SPTSSAQ969W0 71 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 GGTLC1Q9BX51 225 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 TM2D2Q9BX73 214 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 RAB1BQ9H0U4 201 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 ATP23Q9Y6H3 246 aa9.81□□□□□ -0.84
SHMT2-201ENST00000328923 IGKV1-27A0A075B6S5 117 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 RRHO14718 337 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 XGP55808 180 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 RSPO1Q2MKA7 263 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-201ENST00000328923 TM4SF20Q53R12 229 aa9.8□□□□□ -0.84
SHMT2-201ENST00000328923 GCSAMQ8N6F7 178 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms