RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 DUXBA0A1W2PPF3 345 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 FABP12A6NFH5 140 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 SIGLEC16A6NMB1 481 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 C1orf196B1AJZ1 125 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM114B3SHH9 223 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ACOX3O15254 700 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 AQP9O43315 295 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DENRO43583 198 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CTXN2P0C2S0 81 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PGA4P0DJD7 388 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PGA3P0DJD8 388 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF708P17019 499 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TAC1P20366 129 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CA5AP35218 305 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ETV6P41212 452 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ACTR1BP42025 376 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HCCSP53701 268 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RAB4BP61018 213 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RAB5BP61020 215 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RPS28P62857 69 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 MT1HP80294 61 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 Q499Y3 187 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HBMQ6B0K9 141 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TTC33Q6PID6 262 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PDZD9Q8IXQ8 264 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF555Q8NEP9 628 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GPR32P1Q8NGA4 272 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4K17Q8NGC6 315 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR9I1Q8NGQ6 314 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TCP10LQ8TDR4 215 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 BLNKQ8WV28 456 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5P3Q8WZ94 311 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CENPNQ96H22 339 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DERL3Q96Q80 235 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 UQCC2Q9BRT2 126 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DCUN1D5Q9BTE7 237 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF426Q9BUY5 554 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM107BQ9H098 131 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 MRPL16Q9NX20 251 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RABL2AQ9UBK7 228 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 POFUT2Q9Y2G5 429 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5K4A6NMS3 321 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 B4DSR2 109 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 J3QT63 122 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 KPNA4O00629 521 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ENSAO43768 121 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ADAP1O75689 374 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 SC5DO75845 299 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GPX1P07203 203 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5AC1P0C628 307 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GABRG2P18507 467 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GZMHP20718 246 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 DDTP30046 118 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 KLF3P57682 345 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TAS2R41P59536 307 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RPL31P62899 125 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TSPAN31Q12999 210 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PAFAH1B3Q15102 231 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ALKBH6Q3KRA9 238 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HSD17B12Q53GQ0 312 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 C6orf183Q5T699 404 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PDPK2PQ6A1A2 396 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 FAHD1Q6P587 224 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TBPL2Q6SJ96 375 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM131AQ6UXB0 335 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 VN1R4Q7Z5H5 301 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 FUNDC1Q8IVP5 155 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF645Q8N7E2 425 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GDPD1Q8N9F7 314 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 LRRC75AQ8NAA5 344 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 GATD1Q8NB37 220 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4A5Q8NH83 315 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNRF2Q8NHG8 242 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF418Q8TF45 676 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CACNG8Q8WXS5 425 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR8D1Q8WZ84 308 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 APOBEC3DQ96AK3 386 aaPredicted RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 IGF2BP2-AS1Q96M15 143 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 HINT2Q9BX68 163 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 EIF5A2Q9GZV4 153 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 OR51I1Q9H343 314 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TUBA4BQ9H853 241 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 PLEKHA1Q9HB21 404 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 C12orf4Q9NQ89 552 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 UQCC1Q9NVA1 299 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CACFD1Q9UGQ2 172 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 ANGPT4Q9Y264 503 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TRBV24-1A0A075B6N3 115 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A087WSZ3 146 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 MEIKINA0A087WXM9 373 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHV6-1A0A0B4J1U7 121 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 TRAV8-2A0A0B4J237 113 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CXorf51AA0A1B0GTR3 108 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 C2orf74A8MZ97 194 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 MIF4GDA9UHW6 222 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 F8W036 122 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 H3BQV1 296 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CIAO1O76071 339 aa0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 RPP14O95059 124 aaKnown RBP0.56□□□□□ -2.32
CCDC144A-201ENST00000328495 CA2P00918 260 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms