RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 A0A1W2PRD5 423 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 A0A1W2PRF3 423 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 A0A1W2PRM7 423 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 YIF1AO95070 293 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 VENTXO95231 258 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
TPM3-205ENST00000328159 BCL2P10415 239 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
TPM3-205ENST00000328159 MAS1LP35410 378 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 MIC13Q5XKP0 118 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 RAB24Q969Q5 203 aa11.99□□□□□ -0.49
TPM3-205ENST00000328159 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 ZFP92A6NM28 416 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 SEC14L6B5MCN3 397 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 PLXNB1O43157 2135 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 ACTL6BO94805 426 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 IFNA1P01562 189 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
TPM3-205ENST00000328159 CDC34P49427 236 aaPredicted RBP11.98□□□□□ -0.49
TPM3-205ENST00000328159 RAB31Q13636 194 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 TNXAQ16473 311 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 GCSAMLQ5JQS6 135 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 CFHR4Q92496 578 aa11.98□□□□□ -0.49
TPM3-205ENST00000328159 FLNCQ14315 2725 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 SUB1P53999 127 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM3-205ENST00000328159 CD69Q07108 199 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 HABP2Q14520 560 aaPredicted RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 SOHLH1Q5JUK2 328 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 TMEM144Q7Z5S9 345 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 PPP1R27Q86WC6 154 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 P2RX4Q99571 388 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 NAV3Q8IVL0 2385 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 WNK2Q9Y3S1 2297 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 IGLC7A0M8Q6 106 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 FOXH1O75593 365 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 FBP1P09467 338 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 RPL29P47914 159 aaKnown RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
TPM3-205ENST00000328159 GAMTQ14353 236 aa11.97□□□□□ -0.49
TPM3-205ENST00000328159 ZNF462Q96JM2 2506 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 OOSP1A8MZH6 123 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 TOX4O94842 621 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 DEFA4P12838 97 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 B2MP61769 119 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 GNB1P62873 340 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 MLANAQ16655 118 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 RBMS3Q6XE24 437 aaKnown RBP11.96□□□□□ -0.49
TPM3-205ENST00000328159 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 STPG3Q8N7X2 389 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
TPM3-205ENST00000328159 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 FAM168AQ92567 244 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 TMPRSS5Q9H3S3 457 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 VAX2Q9UIW0 290 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
TPM3-205ENST00000328159 A0A1W2PPV4 95 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 LGALS4P56470 323 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 SSX2Q16385 188 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 CYB561D1Q8N8Q1 229 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 SLC35E1Q96K37 410 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 SLC45A2Q9UMX9 530 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 MED13LQ71F56 2210 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 MOSP00540 346 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 REG1AP05451 166 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PAX6P26367 422 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 CEBPGP53567 150 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PRR20EP86478 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PRR20CP86479 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PRR20DP86480 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PRR20BP86481 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PRR20AP86496 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 PLGLAQ15195 96 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 MMDQ15546 238 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 CCDC144NLQ6NUI1 221 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
TPM3-205ENST00000328159 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 NDUFS8O00217 210 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 FCN1O00602 326 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 NBR2O15453 112 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 LINC00869P0C866 280 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 OR10J1P30954 320 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 ATP5J2P56134 94 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 SRSF1Q07955 248 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■□□□□ 8.7
TPM3-205ENST00000328159 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 TMEM88Q6PEY1 159 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
TPM3-205ENST00000328159 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms