RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 HIST1H2BAQ96A08 127 aa9.1□□□□□ -0.95
TOP3A-201ENST00000321105 ATP5J2P56134 94 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 ZNF705AQ6ZN79 300 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-201ENST00000321105 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 CLEC7AQ9BXN2 247 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 FN1P02751 2386 aaKnown RBP9.09□□□□□ -0.95
TOP3A-201ENST00000321105 FAM90A26D6RGX4 464 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 K7EQM0 130 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 CTRB1P17538 263 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 ARL3P36405 182 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 CTRB2Q6GPI1 263 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 PERPQ96FX8 193 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 AMMECR1Q9Y4X0 333 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-201ENST00000321105 ACANP16112 2415 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 AP4M1O00189 453 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 COL8A2P25067 703 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 DEFA6Q01524 100 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 KLRD1Q13241 179 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 DHRS7BQ6IAN0 325 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-201ENST00000321105 RPP25LQ8N5L8 163 aaKnown RBP9.09□□□□□ -0.95
TOP3A-201ENST00000321105 LRTM2Q8N967 370 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 PAXXQ9BUH6 204 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 MANBALQ9NQG1 85 aa9.09□□□□□ -0.95
TOP3A-201ENST00000321105 PGPA6NDG6 321 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 SLC17A3O00476 420 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 FGF16O43320 207 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF207O43670 478 aaKnown RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 IL6RP08887 468 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 C1QTNF9P0C862 333 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 KLF17Q5JT82 389 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 GPR61Q9BZJ8 451 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 GSX1Q9H4S2 264 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 YPEL1O60688 119 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 IGKV1D-33P01593 117 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 IGKV1-33P01594 117 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 FABP1P07148 127 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 ADCYAP1P18509 176 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 PLA2G5P39877 138 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 MBNL2Q5VZF2 373 aaKnown RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 OR4F17Q8NGA8 305 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 YPEL2Q96QA6 119 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 LIPFP07098 398 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 PNRC1Q12796 327 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-201ENST00000321105 VKORC1Q9BQB6 163 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 NAGKQ9UJ70 344 aa9.08□□□□□ -0.96
TOP3A-201ENST00000321105 TRAV20A0A0B4J274 112 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 E7EQL1 145 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 MC5RP33032 325 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 NUBP1P53384 320 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF672Q499Z4 452 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 WFDC3Q8IUB2 231 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 POM121Q96HA1 1249 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 LINC00312Q9Y6C7 94 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 ACAA1P09110 424 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 FCGR2BP31994 310 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF134P52741 427 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 ETFRF1Q6IPR1 90 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 MMD2Q8IY49 270 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 SCO2A0A1W2PP80 73 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 SNURFLB1AK76 121 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 USF1P22415 310 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 LGALS7P47929 136 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
TOP3A-201ENST00000321105 RBM14Q96PK6 669 aaKnown RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 RPUSD1Q9UJJ7 312 aaKnown RBP9.07□□□□□ -0.96
TOP3A-201ENST00000321105 MUC21A0A0G2JKD1 596 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 MUC21A0A140T8X8 626 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 SH2D7A6NKC9 451 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-201ENST00000321105 HYPMO75409 117 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 HSBP1O75506 76 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 LY86O95711 162 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 BRS3P32247 399 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 PPOXP50336 477 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 MUC21Q5SSG8 566 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 C22orf34Q6ZV56 151 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 CLDND2Q8NHS1 167 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 TMEM186Q96B77 213 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 GRIFINA4D1Z8 144 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 NDUFS7O75251 213 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 CLN5O75503 358 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 WNT2P09544 360 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 HTN1P15515 57 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 GNLYP22749 145 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 CD81P60033 236 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 SPATA31B1PQ5VZV4 182 aa9.06□□□□□ -0.96
TOP3A-201ENST00000321105 SEM1Q6ZVN7 128 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms