RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PAM16Q9Y3D7 125 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 GNG7O60262 68 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 RALYQ9UKM9 306 aaKnown RBP11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 CACNA1AO00555 2505 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 C8orf88P0DMB2 117 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 SELENOTP62341 195 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 GATAD1Q8WUU5 269 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 AAMDCQ9H7C9 122 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 THYN1Q9P016 225 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 GFRA3O60609 400 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 TNFSF13O75888 250 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 NUBP1P53384 320 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 ARF6P62330 175 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 WDR73Q6P4I2 378 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 SPACA3Q8IXA5 215 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 DNAJC4Q9NNZ3 241 aa11.12□□□□□ -0.63
PCDHB9-201ENST00000316105 HYPMO75409 117 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 IGKV1-39P01597 117 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 IGKV1D-39P04432 117 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 C11orf42Q8N5U0 333 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 CCKARP32238 428 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 PAX9P55771 341 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 PRB3Q04118 309 aaPredicted RBP11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 DOLPP1Q86YN1 238 aa11.11□□□□□ -0.63
PCDHB9-201ENST00000316105 CGAP01215 116 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 LMO1P25800 156 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 CLEC7AQ9BXN2 247 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 TRAV3A0A0B4J244 114 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 ZNF253O75346 499 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 SPSB3Q6PJ21 355 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 Q6ZN92 141 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 PIP4P1Q86T03 277 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 VENTXO95231 258 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 AMTP48728 403 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 HLA-DRB5Q30154 266 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 A0A1B0GW64 132 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 LGALS7P47929 136 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 PNKDQ8N490 385 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 LPAR2Q9HBW0 351 aa11.1□□□□□ -0.63
PCDHB9-201ENST00000316105 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 SERTM2A0A1B0GWG4 89 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 UPK2O00526 184 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 SFRP2Q96HF1 295 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 TBX15Q96SF7 602 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 UBE2CO00762 179 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 FXYD3Q14802 87 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 SRD5A3Q9H8P0 318 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 Q9UFV3 132 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 EML5Q05BV3 1969 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 MOSP00540 346 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 ELOBQ15370 118 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 OR1P1Q8NH06 330 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 FAM122AQ96E09 287 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
PCDHB9-201ENST00000316105 ZNF785A8K8V0 405 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 LYNX1P0DP58 116 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 HTR1DP28221 377 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 CRIP3Q6Q6R5 217 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 RNASE6Q93091 150 aaKnown RBP11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 NDFIP1Q9BT67 221 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.63
PCDHB9-201ENST00000316105 ACACBO00763 2458 aa11.08□□□□□ -0.64
PCDHB9-201ENST00000316105 SCGB2A2Q13296 93 aa11.08□□□□□ -0.64
PCDHB9-201ENST00000316105 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
PCDHB9-201ENST00000316105 RNASEKQ6P5S7 137 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms