RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LY6EQ16553 131 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 SLC25A45Q8N413 288 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 SSBP4Q9BWG4 385 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-201ENST00000312413 ELOVL5Q9NYP7 299 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 TMEM74BQ9NUR3 256 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 LY75O60449 1722 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 NKX2-8O15522 239 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 HBDP02042 147 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 GATA2P23769 480 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-201ENST00000312413 SPSB2Q99619 263 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 IGKV1D-43A0A0B4J1Z2 117 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 TM4SF5O14894 197 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 RSPO4Q2I0M5 234 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-201ENST00000312413 ZNF585BQ52M93 769 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 OR10J3Q5JRS4 329 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 C21orf62Q9NYP8 219 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
CLCN6-201ENST00000312413 H0YIZ8 118 aa11.52□□□□□ -0.56
CLCN6-201ENST00000312413 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 CEP290O15078 2479 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 CNTFRP26992 372 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 SFTA2Q6UW10 78 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 HIST3H2BBQ8N257 126 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 TRGV3P03979 118 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 Q6ZT83 130 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
CLCN6-201ENST00000312413 SEC11AP67812 179 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-201ENST00000312413 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 FBXL7Q9UJT9 491 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
CLCN6-201ENST00000312413 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
CLCN6-201ENST00000312413 DPM2O94777 84 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
CLCN6-201ENST00000312413 RBMY1A1P0DJD3 496 aaKnown RBP11.51□□□□□ -0.57
CLCN6-201ENST00000312413 RBMY1CP0DJD4 496 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 VKORC1Q9BQB6 163 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 IGHV3-66A0A0C4DH42 116 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 GLRXP35754 106 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 UCNP55089 124 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 S4R3C0 116 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 IGHV3-23P01764 117 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 COQ2Q96H96 371 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 PILRBQ9UKJ0 227 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 CACNA1IQ9P0X4 2223 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 KBTBD11-OT1A0A1B0GTJ5 212 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 NAPSAO96009 420 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 TOMM7Q9P0U1 55 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 FBLN5Q9UBX5 448 aa11.51□□□□□ -0.57
CLCN6-201ENST00000312413 TRBV6-7A0A0A0MS04 114 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 COLCA2A8K830 154 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 TNFSF13O75888 250 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 SLC25A28Q96A46 364 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 HOXA3O43365 443 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-201ENST00000312413 CKS1BP61024 79 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 CD69Q07108 199 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 PAX2Q02962 417 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 C1QTNF5Q9BXJ0 243 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 ALPK2Q86TB3 2170 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 A0A1W2PRE2 83 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 FABP5P3A8MUU1 101 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 OCC1Q8TAD7 63 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 ZNF479Q96JC4 524 aa11.5□□□□□ -0.57
CLCN6-201ENST00000312413 CD5P06127 495 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
CLCN6-201ENST00000312413 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 B9A039 149 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 AMBPP02760 352 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
CLCN6-201ENST00000312413 HSD52Q0P140 79 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 NRN1LQ496H8 165 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 LINC00114Q6XXX2 140 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 FGF11Q92914 225 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
CLCN6-201ENST00000312413 GNG5P63218 68 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
CLCN6-201ENST00000312413 A6NNC1 897 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 A8MWV9 139 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 PPBPP02775 128 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 ID3Q02535 119 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 ASCL2Q99929 193 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-201ENST00000312413 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 PAX1P15863 534 aa11.49□□□□□ -0.57
CLCN6-201ENST00000312413 MPZP25189 248 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms