RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 CX3CL1P78423 397 aa8.28□□□□□ -1.08
TMOD3-201ENST00000308580 IGHV3OR16-8A0A075B7F1 116 aa8.28□□□□□ -1.08
TMOD3-201ENST00000308580 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
TMOD3-201ENST00000308580 RELQ04864 619 aaPredicted RBP8.28□□□□□ -1.08
TMOD3-201ENST00000308580 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
TMOD3-201ENST00000308580 FOXA2Q9Y261 457 aaPredicted RBP8.28□□□□□ -1.08
TMOD3-201ENST00000308580 LYNX1G3V0Z9 82 aa8.27□□□□□ -1.08
TMOD3-201ENST00000308580 LYNX1P0DP58 116 aa8.27□□□□□ -1.08
TMOD3-201ENST00000308580 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.08
TMOD3-201ENST00000308580 WFDC1Q9HC57 220 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 THADAQ6YHU6 1953 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 OR4C46A6NHA9 309 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 FGF16O43320 207 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 SDF2L1Q9HCN8 221 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 USF3Q68DE3 2245 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
TMOD3-201ENST00000308580 IL18BPO95998 194 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 SELLP14151 372 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 DLX1P56177 255 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 LRTM2Q8N967 370 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 MPDZO75970 2070 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 UPK2O00526 184 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 C5orf24Q7Z6I8 188 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 ZNF502Q8TBZ5 544 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 DCAF16Q9NXF7 216 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 A6NDN8 102 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 CCL20P78556 96 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 MBNL2Q5VZF2 373 aaKnown RBP8.27□□□□□ -1.09
TMOD3-201ENST00000308580 TMEM144Q7Z5S9 345 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
TMOD3-201ENST00000308580 FOXI3A8MTJ6 420 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 PSPNO60542 156 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 DUTP33316 252 aaKnown RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 OR52E5Q8NH55 327 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 TP53BP1Q12888 1972 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 SNCGO76070 127 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 IGKV3-15P01624 115 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 DDTP30046 118 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 CDKN1AP38936 164 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 PSMB2P49721 201 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 RAB9AP51151 201 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 LBHQ53QV2 105 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 EEF1AKMT3Q96AZ1 226 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 IMMP2LQ96T52 175 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 PHLDA3Q9Y5J5 127 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 MED13LQ71F56 2210 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 ZNF407Q9C0G0 2248 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 C21orf62Q9NYP8 219 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 HINT1P49773 126 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 AUP1Q9Y679 476 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 PHF3Q92576 2039 aaKnown RBP8.26□□□□□ -1.09
TMOD3-201ENST00000308580 C15orf61A6NNL5 157 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 DOCK7Q96N67 2140 aa8.26□□□□□ -1.09
TMOD3-201ENST00000308580 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 PEX7O00628 323 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 RBFOX2O43251 390 aaKnown RBP eCLIP8.25□□□□□ -1.09
TMOD3-201ENST00000308580 IGHV1-46P01743 117 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 TRGV3P03979 118 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 COL5A1-AS1Q5SY13 56 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 ZNF581Q9P0T4 197 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 SRRM5B3KS81 715 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 GPX1P07203 203 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 OR9G9P0C7N8 305 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 ATOH7Q8N100 152 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 KIAA2026Q5HYC2 2103 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 TRBV9A0A0B4J1U6 114 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 IGHV3-66A0A0C4DH42 116 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 B3GALT5-AS1P59052 145 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 TMEM183AQ8IXX5 376 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 NAPSAO96009 420 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 CCL19Q99731 98 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 C1QTNF9BB2RNN3 333 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 CD24P25063 80 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 RPL23P62829 140 aaKnown RBP8.25□□□□□ -1.09
TMOD3-201ENST00000308580 HBBP68871 147 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
TMOD3-201ENST00000308580 RNASE6Q93091 150 aaKnown RBP8.25□□□□□ -1.09
TMOD3-201ENST00000308580 MAP1LC3AQ9H492 121 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 LILRA1O75019 489 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 SAPCD1Q5SSQ6 148 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 WNT10AQ9GZT5 417 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 IL36BQ9NZH7 164 aa8.25□□□□□ -1.09
TMOD3-201ENST00000308580 GPR183P32249 361 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 FAM209BQ5JX69 171 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 PLSCR4Q9NRQ2 329 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 SOD3P08294 240 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 QRFPP83859 136 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 GCSAMLQ5JQS6 135 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 TEX45Q8NA69 505 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
TMOD3-201ENST00000308580 FOLR2P14207 255 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms