RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 OOSP1A8MZH6 123 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 E7EUB6 86 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 C17orf112F2Z3M2 114 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 TIMM23O14925 209 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 SOX15O60248 233 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 PAX1P15863 534 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ZNF726P1Q15940 193 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 PRSS8Q16651 343 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 GUK1Q16774 197 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 MINOS1Q5TGZ0 78 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ACSM6Q6P461 480 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 OR10W1Q8NGF6 305 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 MBD3L1Q8WWY6 194 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 FAM168AQ92567 244 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 RCC1LQ96I51 464 aaKnown RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 KIAA1456Q9P272 454 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 SIGLEC9Q9Y336 463 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 MINOS1-NBL1R4GNA1 71 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ACANP16112 2415 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 VENTXO95231 258 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 MBP02144 154 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 CNTFRP26992 372 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 MAS1LP35410 378 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ELLP55199 621 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 CCL20P78556 96 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ERHP84090 104 aaKnown RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 C10orf55Q5SWW7 151 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 LHFPL4Q7Z7J7 247 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 TBX15Q96SF7 602 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
TRIM40-205ENST00000307859 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
TRIM40-205ENST00000307859 C9JQL5 133 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 TOX4O94842 621 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 IGKV1D-33P01593 117 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 IGKV1-33P01594 117 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 ATP5J2P56134 94 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 RAB2AP61019 212 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 WT1-ASQ06250 92 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 PEA15Q15121 130 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 FFAR4Q5NUL3 377 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 CCDC144NLQ6NUI1 221 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 CLEC2AQ6UVW9 174 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 SFT2D1Q8WV19 159 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 C1orf159Q96HA4 380 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 SEC11CQ9BY50 192 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 HILPDAQ9Y5L2 63 aa9.52□□□□□ -0.89
TRIM40-205ENST00000307859 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
TRIM40-205ENST00000307859 IGHV4-61A0A0C4DH41 118 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 A0A1B0GV50 99 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 SMCO3A2RU48 225 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 APOC3P02656 99 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 OPRK1P41145 380 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 HNF4GQ14541 408 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 PPP1R27Q86WC6 154 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 RPP25LQ8N5L8 163 aaKnown RBP9.51□□□□□ -0.89
TRIM40-205ENST00000307859 MGST2Q99735 147 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
TRIM40-205ENST00000307859 METTL1Q9UBP6 276 aaKnown RBP9.51□□□□□ -0.89
TRIM40-205ENST00000307859 TBL2Q9Y4P3 447 aaKnown RBP9.51□□□□□ -0.89
TRIM40-205ENST00000307859 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 F8W036 122 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 SCO1O75880 301 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 NDUFA3O95167 84 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 SFTA3P0C7M3 94 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 M6PRP20645 277 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 RPL27AP46776 148 aaKnown RBP9.5□□□□□ -0.89
TRIM40-205ENST00000307859 COMPP49747 757 aaPredicted RBP9.5□□□□□ -0.89
TRIM40-205ENST00000307859 UBE2E1P51965 193 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 PRIMA1Q86XR5 153 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 MRPL41Q8IXM3 137 aaKnown RBP9.5□□□□□ -0.89
TRIM40-205ENST00000307859 ZNF114Q8NC26 417 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 KCNIP2Q9NS61 270 aa9.5□□□□□ -0.89
TRIM40-205ENST00000307859 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 A0A1W2PRF3 423 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 A0A1W2PRM7 423 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 ACTL6BO94805 426 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 MOSP00540 346 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 SSBP2P81877 361 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 CD69Q07108 199 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 TNXAQ16473 311 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 ACOT6Q3I5F7 207 aaPredicted RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 TEPPQ6URK8 271 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 DYNAPQ8N1N2 210 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 NPBQ8NG41 125 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 OR10G4Q8NGN3 311 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 OR10G9Q8NGN4 311 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 OR10G7Q8NGN6 311 aa9.49□□□□□ -0.89
TRIM40-205ENST00000307859 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
TRIM40-205ENST00000307859 CACNG8Q8WXS5 425 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms