RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PLA2G10O15496 165 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SULT1A3P0DMM9 295 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SULT1A4P0DMN0 295 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ZP3P21754 424 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 FHL3Q13643 280 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SPINK9Q5DT21 86 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SLC25A24Q6NUK1 477 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 COQ8AQ8NI60 647 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ENKURQ8TC29 256 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CXorf58Q96LI9 332 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 PEF1Q9UBV8 284 aaKnown RBP8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 F11RQ9Y624 299 aaKnown RBP8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DNHD1Q96M86 4753 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 A0A0B4J293 547 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C9orf170A2RU37 121 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TCRBP04435 133 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR4E1P0C645 316 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SUB1P53999 127 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DEFA1P59665 94 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DEFA3P59666 94 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ASAH1Q13510 395 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SMCO1Q147U7 214 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ZNF343Q6P1L6 599 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 LYZL2Q7Z4W2 148 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 LYG2Q86SG7 212 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR2C3Q8N628 320 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR52E5Q8NH55 327 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 GPR146Q96CH1 333 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 FANCD2OSQ96PS1 177 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TBC1D24Q9ULP9 559 aa8.5□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TRAV6A0A075B6T7 132 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TRBV7-1A0A0A6YYK4 115 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CEBPZOSA8MTT3 80 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OVOL1O14753 267 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 NXPH3O95157 252 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 NDUFB8O95169 186 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 IGLL1P15814 213 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SNCAP37840 140 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SLURP1P55000 103 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SPCS3P61009 180 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DHRS2Q13268 280 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TATDN3Q17R31 274 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ANKRD55Q3KP44 614 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 LRTM2Q8N967 370 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ZNF114Q8NC26 417 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 WFDC9Q8NEX5 89 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR1P1Q8NH06 330 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 MISP3Q96FF7 219 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 NUDT15Q9NV35 164 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 A0A1B0GU03 582 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 G3V4G9 280 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CORTO00230 105 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 IFNA21P01568 189 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 IGHV3-23P01764 117 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HOXB5P09067 269 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 H2AFB2P0C5Z0 115 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 KLK9Q2XQG4 91 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 NMSQ5H8A3 153 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C9orf66Q5T8R8 295 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 Q6ZRM9 215 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 KLK9Q9UKQ9 250 aa8.48□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 MFSD2BA6NFX1 497 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 INS-IGF2F8WCM5 200 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SLC25A6P12236 298 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ARL3P36405 182 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 AARDQ4LEZ3 155 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 VN1R17PQ8TDU5 208 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DCUN1D4Q92564 292 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 PINX1Q96BK5 328 aaKnown RBP8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ELOVL1Q9BW60 279 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HEYLQ9NQ87 328 aaPredicted RBP8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 S4R3C0 116 aa8.47□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 BMPR1BO00238 502 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 GGCTO75223 188 aaKnown RBP8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 MED6O75586 246 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 GPR183P32249 361 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 HTR2BP41595 481 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 TNFRSF9Q07011 255 aa8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 PDLIM3Q53GG5 364 aaPredicted RBP8.46□□□□□ -1.06
CSPG4P1Y-201ENST00000306641 Q56UQ5 140 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms