RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CHODLQ9H9P2 273 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 PATZ1Q9HBE1 687 aaKnown RBP5.27□□□□□ -1.57
USP47-201ENST00000305481 VAX2Q9UIW0 290 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 PXMP4Q9Y6I8 212 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 IGHV1-3A0A0C4DH29 117 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 A0A1B0GV90 55 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 TMEM8BA6NDV4 472 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 SLC25A17O43808 307 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 RAB13P51153 203 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 PNKDQ8N490 385 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 OR4A5Q8NH83 315 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 TIMD4Q96H15 378 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 COMMD5Q9GZQ3 224 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ONECUT1Q9UBC0 465 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 SPTAN1Q13813 2472 aaKnown RBP5.27□□□□□ -1.57
USP47-201ENST00000305481 NAV3Q8IVL0 2385 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 USP24Q9UPU5 2620 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PPH5 198 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 INS-IGF2F8WCM5 200 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ENSAO43768 121 aaKnown RBP5.27□□□□□ -1.57
USP47-201ENST00000305481 LIPFP07098 398 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 CRYGBP07316 175 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ARF6P62330 175 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ACOT6Q3I5F7 207 aaPredicted RBP5.27□□□□□ -1.57
USP47-201ENST00000305481 TEPPQ6URK8 271 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 OR1L8Q8NGR8 309 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 ISOC2Q96AB3 205 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 UBTD1Q9HAC8 227 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 SMCO4Q9NRQ5 59 aa5.27□□□□□ -1.57
USP47-201ENST00000305481 AKAP6Q13023 2319 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 A6NNC1 897 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 CYB5BO43169 146 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 RD3LP0DJH9 198 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 IL3RAP26951 378 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 CDC34P49427 236 aaPredicted RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 GAMTQ14353 236 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 RHEBQ15382 184 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 HCP5Q6MZN7 132 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 IGFBPL1Q8WX77 278 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 SSBP3Q9BWW4 388 aaPredicted RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 SIRT7Q9NRC8 400 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 INSIG2Q9Y5U4 225 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 KLF2Q9Y5W3 355 aaPredicted RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 FNDC10F2Z333 226 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 FABP1P07148 127 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 LINC00869P0C866 280 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 ZFP36P26651 326 aaKnown RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 LGALS7P47929 136 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PRR20EP86478 221 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PRR20CP86479 221 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PRR20DP86480 221 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PRR20BP86481 221 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PRR20AP86496 221 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 MEF2BQ02080 365 aaPredicted RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 STPG3Q8N7X2 389 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 VSTM2AQ8TAG5 236 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 NANPQ8TBE9 248 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 P2RX4Q99571 388 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 UNKLQ9H9P5 680 aaKnown RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 GSN-AS1Q9NRJ2 163 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 USP9XQ93008 2570 aaPredicted RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 LOC105371242A0A075B767 164 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PPE2 198 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PPI3 338 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 PAX6P26367 422 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 RBMS3Q6XE24 437 aaKnown RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 SLC35E3Q7Z769 313 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 ABHD5Q8WTS1 349 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 YPEL4Q96NS1 127 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 TUBA4BQ9H853 241 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 SEPSECSQ9HD40 501 aaKnown RBP5.26□□□□□ -1.57
USP47-201ENST00000305481 SLC45A2Q9UMX9 530 aa5.26□□□□□ -1.57
USP47-201ENST00000305481 ZNF727A8MUV8 499 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 SOX15O60248 233 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 PAGE4O60829 102 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 CRYBA1P05813 215 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 RPL29P47914 159 aaKnown RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 ATP5IP56385 69 aaPredicted RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 S100A12P80511 92 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 KLRD1Q13241 179 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 PSG5Q15238 335 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 TMEM249Q2WGJ8 235 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 VMA21Q3ZAQ7 101 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 SPATA31B1PQ5VZV4 182 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 TMEM144Q7Z5S9 345 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 OR2T6Q8NHC8 308 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 FNDC4Q9H6D8 234 aaPredicted RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 UTP20O75691 2785 aaKnown RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 MED13LQ71F56 2210 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 hCG_1809904A0A1W2PP81 198 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PR64 198 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PRV1 198 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 IGLC7A0M8Q6 106 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 IFNA1P01562 189 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 SSBP2P81877 361 aaPredicted RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 CD69Q07108 199 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 PRSS8Q16651 343 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 FBLN7Q53RD9 439 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms