RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 TSKUQ8WUA8 353 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 HES7Q9BYE0 225 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 LTBP2Q14767 1821 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 CPAMD8Q8IZJ3 1885 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 SNAI2O43623 268 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 SMPD2O60906 423 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 WNT2P09544 360 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
TRIM35-201ENST00000305364 TNXAQ16473 311 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 MPV17L2Q567V2 206 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 Q8NFD4 153 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 OSTCQ9NRP0 149 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 ABCA1O95477 2261 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 M0QZ24 198 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 CHODLQ9H9P2 273 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 AMMECR1Q9Y4X0 333 aaPredicted RBP10.85□□□□□ -0.67
TRIM35-201ENST00000305364 PCNX1Q96RV3 2341 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 PLAUP00749 431 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 HTR1DP28221 377 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 BPIFB3P59826 476 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 ZNF718Q3SXZ3 478 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 PMS2CLQ68D20 193 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 OR2M7Q8NG81 312 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 LINC00470Q9BZP3 86 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 INTS1Q8N201 2190 aaKnown RBP10.84□□□□□ -0.67
TRIM35-201ENST00000305364 C9JCJ5 164 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 HSPE1P61604 102 aaKnown RBP10.84□□□□□ -0.67
TRIM35-201ENST00000305364 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
TRIM35-201ENST00000305364 RTL8BQ17RB0 113 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 PROK2Q9HC23 129 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 OR51B2Q9Y5P1 312 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 IZUMO1RA6ND01 250 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 PRRG2O14669 202 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 ITGB1BP1O14713 200 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 FBXW9Q5XUX1 488 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
TRIM35-201ENST00000305364 K7EN84 100 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 CA7P43166 264 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 C8orf88P0DMB2 117 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 ORM2P19652 201 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 B3GALT5-AS1P59052 145 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 FOXF2Q12947 444 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 LOC102723996A0A087X1L8 192 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 AGFG2O95081 481 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 SP1P08047 785 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 NHLH1Q02575 133 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 PMCHL2Q9BQD1 86 aa10.83□□□□□ -0.68
TRIM35-201ENST00000305364 IGHV3OR15-7A0A075B7D8 119 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 IGHV1-69-2A0A0G2JMI3 117 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 BMPR1BO00238 502 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PRDX2P32119 198 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 LTBRP36941 435 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 GTF2H5Q6ZYL4 71 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 FA2HQ7L5A8 372 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 MRPS16Q9Y3D3 137 aaKnown RBP10.82□□□□□ -0.68
TRIM35-201ENST00000305364 TRAV3A0A0B4J244 114 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 TRAV17A0A0B4J275 112 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 P01737 135 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 CELA3BP08861 270 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 KIR2DS2P43631 304 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 SP5Q6BEB4 398 aaPredicted RBP10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PNKDQ8N490 385 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 HEATR1Q9H583 2144 aaKnown RBP10.82□□□□□ -0.68
TRIM35-201ENST00000305364 KLK10O43240 276 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PSG1P11464 419 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
TRIM35-201ENST00000305364 TMEM136Q6ZRR5 245 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 V9GYV3 84 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 PINLYPA6NC86 204 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
TRIM35-201ENST00000305364 ASPHD1Q5U4P2 390 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
TRIM35-201ENST00000305364 TRGV5A0A0B4J1U4 118 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 ZNF891A8MT65 544 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-201ENST00000305364 HIGD1CA8MV81 97 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 KLF7O75840 302 aaPredicted RBP10.81□□□□□ -0.68
TRIM35-201ENST00000305364 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 OR5AL1P0C617 328 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 SFXN3Q9BWM7 321 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 ZNF503-AS2A6NEH8 195 aa10.81□□□□□ -0.68
TRIM35-201ENST00000305364 DUTP33316 252 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms