RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 C15orf40Q8WUR7 153 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 GGTLC1Q9BX51 225 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 WFDC10AQ9H1F0 79 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 NSG2Q9Y328 171 aa12.49□□□□□ -0.41
TRAPPC1-201ENST00000303731 SCAF4O95104 1147 aaKnown RBP12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 ELK1P19419 428 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 OR2C3Q8N628 320 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 OR4A16Q8NH70 328 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 ZNF486Q96H40 463 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 RETNQ9HD89 108 aa12.48□□□□□ -0.41
TRAPPC1-201ENST00000303731 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 K7EMT4 169 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 TSPAN4O14817 238 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 HPGDSO60760 199 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 TBPP20226 339 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 RELQ04864 619 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
TRAPPC1-201ENST00000303731 RYR2Q92736 4967 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 C15orf62A8K5M9 175 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 FAM25AB3EWG3 89 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 FAM25CB3EWG5 89 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 FAM25GB3EWG6 89 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 K7EIM0 57 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 ATG12O94817 140 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 MFAP2P55001 183 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 RND3P61587 244 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 PRCDQ00LT1 54 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 Q56UQ5 140 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 TXN2Q99757 166 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 FAM110AQ9BQ89 295 aa12.46□□□□□ -0.41
TRAPPC1-201ENST00000303731 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-201ENST00000303731 GABARAPO95166 117 aa12.45□□□□□ -0.42
TRAPPC1-201ENST00000303731 ZNF182P17025 639 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC1-201ENST00000303731 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-201ENST00000303731 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
TRAPPC1-201ENST00000303731 DNAH1Q9P2D7 4330 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 OR4C46A6NHA9 309 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 APOC4P55056 127 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 MFAP4P55083 255 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 HSPE1P61604 102 aaKnown RBP12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 ERHP84090 104 aaKnown RBP12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 SELENOKQ9Y6D0 94 aa12.44□□□□□ -0.42
TRAPPC1-201ENST00000303731 IGHV3-21A0A0B4J1V1 117 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 DBX1A6NMT0 343 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 JTBO76095 146 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 IGKV1-39P01597 117 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 IGKV1D-39P04432 117 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 CTSGP08311 255 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 PGAM2P15259 253 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 ADMP35318 185 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 CTF1Q16619 201 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 LHFPL1Q86WI0 220 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 MISP3Q96FF7 219 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 EXTL2Q9UBQ6 330 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 MTFP1Q9UDX5 166 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
TRAPPC1-201ENST00000303731 I3L2K1 104 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 M0QYG6 137 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 UBE2CO00762 179 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 PIGPP57054 158 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 Q6ZWC4 215 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 CCDC71LQ8N9Z2 235 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 ZFAND1Q8TCF1 268 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 KLK11Q9UBX7 282 aa12.42□□□□□ -0.42
TRAPPC1-201ENST00000303731 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 INS-IGF2F8WCM5 200 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 CD3DP04234 171 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 CD5P06127 495 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 BMI1P35226 326 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 AKR1C2P52895 323 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 TAS2R19P59542 299 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 MRPS10P82664 201 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 OR52I2Q8NH67 350 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 OR10C1Q96KK4 312 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 PDCD10Q9BUL8 212 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 C6orf62Q9GZU0 229 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 NXF2Q9GZY0 626 aaKnown RBP12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
TRAPPC1-201ENST00000303731 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 CORTO00230 105 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 GNG7O60262 68 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 MT-CO2P00403 227 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 SNCAP37840 140 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms