RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 KIAA1456Q9P272 454 aa9.65□□□□□ -0.86
TPM3-202ENST00000302206 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
TPM3-202ENST00000302206 TBL2Q9Y4P3 447 aaKnown RBP9.65□□□□□ -0.86
TPM3-202ENST00000302206 OPRK1P41145 380 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
TPM3-202ENST00000302206 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
TPM3-202ENST00000302206 LDLRAD2Q5SZI1 272 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 CLEC2AQ6UVW9 174 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 CACNG8Q8WXS5 425 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
TPM3-202ENST00000302206 RITA1Q96K30 269 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 SRSF8Q9BRL6 282 aaKnown RBP9.64□□□□□ -0.87
TPM3-202ENST00000302206 SIGLEC9Q9Y336 463 aa9.64□□□□□ -0.87
TPM3-202ENST00000302206 LSM4Q9Y4Z0 139 aaKnown RBP9.64□□□□□ -0.87
TPM3-202ENST00000302206 MAP1AP78559 2803 aaPredicted RBP9.63□□□□□ -0.87
TPM3-202ENST00000302206 IGHV3-72A0A0B4J1Y9 119 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 FAM157AC9JC47 383 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 TIMM23O14925 209 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 AGPAT2O15120 278 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 TSPAN9O75954 239 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 TOX4O94842 621 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 VENTXO95231 258 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 GPX4P36969 197 aaPredicted RBP9.63□□□□□ -0.87
TPM3-202ENST00000302206 UBE2E1P51965 193 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 ATP5J2P56134 94 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 LCN2P80188 198 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 KLRD1Q13241 179 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 ACOT6Q3I5F7 207 aaPredicted RBP9.63□□□□□ -0.87
TPM3-202ENST00000302206 FFAR4Q5NUL3 377 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 NPBQ8NG41 125 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 RNASEH2CQ8TDP1 164 aaKnown RBP9.63□□□□□ -0.87
TPM3-202ENST00000302206 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 RCC1LQ96I51 464 aaKnown RBP9.63□□□□□ -0.87
TPM3-202ENST00000302206 FAM96BQ9Y3D0 163 aa9.63□□□□□ -0.87
TPM3-202ENST00000302206 CTXND1A0A1B0GTU2 59 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 F8W036 122 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 NDUFS6O75380 124 aaKnown RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 M6PRP20645 277 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 RPL27AP46776 148 aaKnown RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 LGALS4P56470 323 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 RAB31Q13636 194 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 EBI3Q14213 229 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 ZNF726P1Q15940 193 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 TMEM249Q2WGJ8 235 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 ARSJQ5FYB0 599 aaPredicted RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 PPP1R27Q86WC6 154 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 TBX15Q96SF7 602 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 ACTR3CQ9C0K3 210 aaPredicted RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 LPAR2Q9HBW0 351 aa9.62□□□□□ -0.87
TPM3-202ENST00000302206 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
TPM3-202ENST00000302206 ZNF469Q96JG9 3925 aaPredicted RBP9.61□□□□□ -0.87
TPM3-202ENST00000302206 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 SEC14L6B5MCN3 397 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 CYB5BO43169 146 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 ACTL6BO94805 426 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 NDUFA3O95167 84 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 MOSP00540 346 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 APOC3P02656 99 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OPN1MWP04001 364 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 SFTA3P0C7M3 94 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 RPL29P47914 159 aaKnown RBP9.61□□□□□ -0.87
TPM3-202ENST00000302206 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
TPM3-202ENST00000302206 CCL20P78556 96 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 AKR1C1Q04828 323 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 WT1-ASQ06250 92 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 PAX8Q06710 450 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 CD69Q07108 199 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 KHDC3LQ587J8 217 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 TEPPQ6URK8 271 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 SVBPQ8N300 66 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 RPP25LQ8N5L8 163 aaKnown RBP9.61□□□□□ -0.87
TPM3-202ENST00000302206 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OR10G4Q8NGN3 311 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 OR2T10Q8NGZ9 312 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 MALSU1Q96EH3 234 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 MGST2Q99735 147 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 GGTLC1Q9BX51 225 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
TPM3-202ENST00000302206 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
TPM3-202ENST00000302206 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
TPM3-202ENST00000302206 MAP1LC3B2A6NCE7 125 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms