RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TMPRSS5Q9H3S3 457 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 KIAA1456Q9P272 454 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 METTL1Q9UBP6 276 aaKnown RBP20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 IGHV4-61A0A0C4DH41 118 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 IGHV3-48P01763 117 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 PDLIM4P50479 330 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 GNB1P62873 340 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 SSBP2P81877 361 aaPredicted RBP20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 TNXAQ16473 311 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 FAM122CQ6P4D5 195 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 LFNGQ8NES3 379 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 GGTLC1Q9BX51 225 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 GNG13Q9P2W3 67 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 LSM4Q9Y4Z0 139 aaKnown RBP20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 CHD6Q8TD26 2715 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 OR13C7P0DN81 318 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 NPBWR1P48145 328 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 MBD3L1Q8WWY6 194 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 TBX15Q96SF7 602 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 MAP1LC3B2A6NCE7 125 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 YIF1AO95070 293 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 PEA15Q15121 130 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 C2orf83Q53S99 150 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 PERPQ96FX8 193 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 GGACTQ9BVM4 153 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 MAP1LC3BQ9GZQ8 125 aa20.54■□□□□ 0.88
SDCCAG3-201ENST00000298537 IGKV1OR2-108A0A075B7D4 117 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 ATP5J2P56134 94 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 LGALS4P56470 323 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 ICAM4Q14773 271 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 TEX45Q8NA69 505 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 RXFP4Q8TDU9 374 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 KPTNQ9Y664 436 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 ZFP92A6NM28 416 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 AREGP15514 252 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 COL8A1P27658 744 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 NPVFQ9HCQ7 196 aa20.53■□□□□ 0.88
SDCCAG3-201ENST00000298537 NBPF19A0A087WUL8 3843 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 FAM74A7A6NL05 159 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 TOX4O94842 621 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 FAM74A3Q4VXF1 159 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 C1orf122Q6ZSJ8 110 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 FAM168AQ92567 244 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 PBDC1Q9BVG4 233 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 NKX6-2Q9C056 277 aaPredicted RBP20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 SLC39A9Q9NUM3 307 aa20.52■□□□□ 0.88
SDCCAG3-201ENST00000298537 TRAV1-1A0A0B4J248 108 aa20.52■□□□□ 0.87
SDCCAG3-201ENST00000298537 RUSC1-AS1Q66K80 236 aa20.52■□□□□ 0.87
SDCCAG3-201ENST00000298537 KIR3DL3Q8N743 410 aa20.52■□□□□ 0.87
SDCCAG3-201ENST00000298537 P2RX4Q99571 388 aa20.52■□□□□ 0.87
SDCCAG3-201ENST00000298537 UNKLQ9H9P5 680 aaKnown RBP20.52■□□□□ 0.87
SDCCAG3-201ENST00000298537 IGHV4-30-2A0A087WSY4 118 aa20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 C17orf112F2Z3M2 114 aa20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 ERHP84090 104 aaKnown RBP20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 PPP1R27Q86WC6 154 aa20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 OR2T6Q8NHC8 308 aa20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 RAB24Q969Q5 203 aa20.51■□□□□ 0.87
SDCCAG3-201ENST00000298537 IGLC7A0M8Q6 106 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 BTBD17A6NE02 478 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 SCAF4O95104 1147 aaKnown RBP20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 GAMTQ14353 236 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 SVBPQ8N300 66 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 PXMP4Q9Y6I8 212 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 HBE1P02100 147 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 GATA2P23769 480 aaPredicted RBP20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 CEBPGP53567 150 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 MMDQ15546 238 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 C10orf105Q8TEF2 133 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 GATAD1Q8WUU5 269 aa20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 FNDC4Q9H6D8 234 aaPredicted RBP20.5■□□□□ 0.87
SDCCAG3-201ENST00000298537 MMD2Q8IY49 270 aa20.49■□□□□ 0.87
SDCCAG3-201ENST00000298537 MFAP2P55001 183 aa20.49■□□□□ 0.87
SDCCAG3-201ENST00000298537 TEPPQ6URK8 271 aa20.49■□□□□ 0.87
SDCCAG3-201ENST00000298537 MRPL36Q9P0J6 103 aaKnown RBP20.49■□□□□ 0.87
SDCCAG3-201ENST00000298537 A0A1W2PN81 502 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 SNRNP70P08621 437 aaKnown RBP20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 CHRNA7P36544 502 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 HES1Q14469 280 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 TMEM88Q6PEY1 159 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 SLC35B3Q9H1N7 401 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 GOSR1O95249 250 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 RPL27AP46776 148 aaKnown RBP20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 COMPP49747 757 aaPredicted RBP20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 AKIRIN2Q53H80 203 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 AJUBAQ96IF1 538 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 EAF1Q96JC9 268 aaPredicted RBP20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 PIMREGQ9BSJ6 248 aa20.48■□□□□ 0.87
SDCCAG3-201ENST00000298537 ABCA1O95477 2261 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 LOC102723971A0A1B0GUV8 181 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 INS-IGF2F8WCM5 200 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 DNASE2O00115 360 aaPredicted RBP20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 ACTL6BO94805 426 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 SRP19P09132 144 aaKnown RBP20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 CEACAM3P40198 252 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 OPRK1P41145 380 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 CD69Q07108 199 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 HABP2Q14520 560 aaPredicted RBP20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 PLGLAQ15195 96 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 ZNF506Q5JVG8 444 aa20.47■□□□□ 0.87
SDCCAG3-201ENST00000298537 STPG3Q8N7X2 389 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms