RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 EEF1AKMT3Q96AZ1 226 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 NAPSAO96009 420 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 GCHFRP30047 84 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 PARLQ9H300 379 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 GNLYP22749 145 aa12.6□□□□□ -0.39
ARHGEF28-202ENST00000296799 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 ID3Q02535 119 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.399e-9■■■■■ 47.3
ARHGEF28-202ENST00000296799 TFF3Q07654 80 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 OR4B1Q8NGF8 309 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 MRPL32Q9BYC8 188 aaKnown RBP12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 FBXL7Q9UJT9 491 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 DPRXA6NFQ7 191 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 CBY1Q9Y3M2 126 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 UPK2O00526 184 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 MGPP08493 103 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 RAB9AP51151 201 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 PPP1R27Q86WC6 154 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 CACNG8Q8WXS5 425 aa12.59□□□□□ -0.39
ARHGEF28-202ENST00000296799 APCSP02743 223 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 RELQ04864 619 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF273Q14593 569 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM250H0YL14 139 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 IGHV3-23P01764 117 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF525Q8N782 197 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 ARPC1AQ92747 370 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 TCAPO15273 167 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 MLNRO43193 412 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 NBEAP1P0C6P0 100 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 CA7P43166 264 aa12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 SRSF12Q8WXF0 261 aaKnown RBP12.58□□□□□ -0.4
ARHGEF28-202ENST00000296799 IGHV3OR16-8A0A075B7F1 116 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 HEPN1Q6WQI6 88 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM116Q8NCL8 245 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 NBR2O15453 112 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 C5orf24Q7Z6I8 188 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 CD177Q8N6Q3 437 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 PIP4P1Q86T03 277 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 WNT10AQ9GZT5 417 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 CD55P08174 381 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF581Q9P0T4 197 aa12.57□□□□□ -0.4
ARHGEF28-202ENST00000296799 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 TRGC2P03986 189 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 GPR183P32249 361 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 NBL1P41271 181 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 HNRNPA3P51991 378 aaKnown RBP12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 QRFPP83859 136 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM177Q53S58 311 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 WDR25Q64LD2 544 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 PACRGQ96M98 296 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 IGF2RP11717 2491 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 TIMM23O14925 209 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 AGAP20933 346 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 ELOBQ15370 118 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF207O43670 478 aaKnown RBP12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 LRTM2Q8N967 370 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 PLXND1Q9Y4D7 1925 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 MED13Q9UHV7 2174 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 CGAP01215 116 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 CCKARP32238 428 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 DLX6P56179 175 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 ICAM4Q14773 271 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 SRSF7Q16629 238 aaKnown RBP eCLIP12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 TRAV34A0A0B4J273 112 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 MT-ND6P03923 174 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 EFNA4P52798 201 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF600Q6ZNG1 722 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 AMY1AP04745 511 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 CD81P60033 236 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 PSG9Q00887 426 aa12.55□□□□□ -0.4
ARHGEF28-202ENST00000296799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.54□□□□□ -0.4
ARHGEF28-202ENST00000296799 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
ARHGEF28-202ENST00000296799 ZNF343Q6P1L6 599 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms