RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A8PA6NJQ4 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A22PA8MWA6 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A12PA8MX19 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A5PA8MXJ8 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A15PP0C7V4 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A13PP0C7W8 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A14PP0C7W9 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 FAM90A24PP0C7X0 464 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 CCL1P22362 96 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
HPS3-201ENST00000296051 PRDM14Q9GZV8 571 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 ANAPC1Q9H1A4 1944 aa11.28□□□□□ -0.6
HPS3-201ENST00000296051 DPRXA6NFQ7 191 aa11.27□□□□□ -0.6
HPS3-201ENST00000296051 C12orf77C9JDV5 145 aa11.27□□□□□ -0.6
HPS3-201ENST00000296051 SPSB3Q6PJ21 355 aa11.27□□□□□ -0.6
HPS3-201ENST00000296051 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.6
HPS3-201ENST00000296051 GTF3C1Q12789 2109 aa11.27□□□□□ -0.6
HPS3-201ENST00000296051 PINLYPA6NC86 204 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 EREGO14944 169 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 ADMP35318 185 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 PLSCR2Q9NRY7 297 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 IFITM10A6NMD0 228 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 MC5RP33032 325 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 TCF19Q9Y242 345 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 CELA3BP08861 270 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 LINC00869P0C866 280 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.61
HPS3-201ENST00000296051 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 ZNF462Q96JM2 2506 aa11.27□□□□□ -0.61
HPS3-201ENST00000296051 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 GZMBP10144 247 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 COX5BP10606 129 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 RNFT1Q5M7Z0 435 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 DNM1P46Q6ZS02 220 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 PLPPR1Q8TBJ4 325 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 IGHV2OR16-5A0A0B4J2B6 119 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 GCHFRP30047 84 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 TECTAO75443 2155 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 PPOXP50336 477 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 LHX2P50458 406 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 CLDN18P56856 261 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 FOXF2Q12947 444 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 GTF3AQ92664 365 aaKnown RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 C1orf147Q96MC9 270 aaPredicted RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 TMEM50AO95807 157 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 WBP1Q96G27 269 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 PAXXQ9BUH6 204 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
HPS3-201ENST00000296051 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
HPS3-201ENST00000296051 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 LINC00205P59089 165 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 RELBQ01201 579 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 FAM216BQ8N7L0 139 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 ZNF716A6NP11 495 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 VENTXO95231 258 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 Q6ZRM9 215 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 OR5P3Q8WZ94 311 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
HPS3-201ENST00000296051 CLEC7AQ9BXN2 247 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 PRSS1P07477 247 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 PSG7Q13046 419 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 SPSB4Q96A44 273 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 NEU1Q99519 415 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 THSD7BQ9C0I4 1608 aa11.25□□□□□ -0.61
HPS3-201ENST00000296051 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 MT-ND6P03923 174 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 GCSAMQ8N6F7 178 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 PGPA6NDG6 321 aa11.24□□□□□ -0.61
HPS3-201ENST00000296051 HIST1H1EP10412 219 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms