RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 IFT22Q9H7X7 185 aa9.43□□□□□ -0.9
USP6NL-201ENST00000277575 LAMA1P25391 3075 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 J3QR89 54 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 RNF224P0DH78 156 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 SAA1P0DJI8 122 aaPredicted RBP9.42□□□□□ -0.9
USP6NL-201ENST00000277575 WDR25Q64LD2 544 aaPredicted RBP9.42□□□□□ -0.9
USP6NL-201ENST00000277575 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 CACNG8Q8WXS5 425 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 CKS2P33552 79 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 WFIKKN1Q96NZ8 548 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
USP6NL-201ENST00000277575 SLC25A15Q9Y619 301 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 HERVK_113P61574 105 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 ICAM4Q14773 271 aa9.42□□□□□ -0.9
USP6NL-201ENST00000277575 TRAV20A0A0B4J274 112 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 C5orf63A6NC05 138 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 SELLP14151 372 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 DLX6P56179 175 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 CX3CL1P78423 397 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 SCN8AQ9UQD0 1980 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 HEATR5AQ86XA9 2040 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 IGHG3P01860 377 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 GPX1P07203 203 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 GPR183P32249 361 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 TFF3Q07654 80 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 CLDND2Q8NHS1 167 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 VPS13AQ96RL7 3174 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 UPK2O00526 184 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 NAT1P18440 290 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 CD24P25063 80 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF672Q499Z4 452 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 LRRK1Q38SD2 2015 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 IGKV1-27A0A075B6S5 117 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 TRAV14DV4A0A0A6YYC5 116 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 MBD3L4A6NDZ8 208 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 MBD3L3A6NE82 208 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 MBD3L5A6NJ08 208 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 IGKV3-15P01624 115 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 AMY1AP04745 511 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 ANOS1P23352 680 aa9.41□□□□□ -0.9
USP6NL-201ENST00000277575 MBD3L2Q8NHZ7 208 aaPredicted RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 PNRC2Q9NPJ4 139 aaKnown RBP9.41□□□□□ -0.9
USP6NL-201ENST00000277575 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 NBR2O15453 112 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 SIAH2O43255 324 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 RELBQ01201 579 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 MBNL2Q5VZF2 373 aaKnown RBP9.4□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF841Q6ZN19 808 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
USP6NL-201ENST00000277575 VN1R17PQ8TDU5 208 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 FANCMQ8IYD8 2048 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 PTPRDP23468 1912 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 PSPNO60542 156 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 GCGP01275 180 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 SMIM6P0DI80 62 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 CD99P14209 185 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 GATA2P23769 480 aaPredicted RBP9.4□□□□□ -0.9
USP6NL-201ENST00000277575 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
USP6NL-201ENST00000277575 UNQ6494/PRO21346Q6UXR6 183 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 ZNF525Q8N782 197 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 RAX2Q96IS3 184 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 WNT10AQ9GZT5 417 aa9.4□□□□□ -0.9
USP6NL-201ENST00000277575 RAMP3O60896 148 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 CGAP01215 116 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 DUTP33316 252 aaKnown RBP9.4□□□□□ -0.91
USP6NL-201ENST00000277575 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.91
USP6NL-201ENST00000277575 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.91
USP6NL-201ENST00000277575 RRN3P1Q2M238 152 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 CENPWQ5EE01 88 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 BET1LQ9NYM9 111 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.91
USP6NL-201ENST00000277575 FRYLO94915 3013 aa9.4□□□□□ -0.91
USP6NL-201ENST00000277575 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 F8VVB4 439 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 F8VWA3 439 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 M0R143 59 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-201ENST00000277575 LY6G6FQ5SQ64 297 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 PAM16Q9Y3D7 125 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 FOXI3A8MTJ6 420 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-201ENST00000277575 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 TSPOP30536 169 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
USP6NL-201ENST00000277575 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
USP6NL-201ENST00000277575 SAPCD1Q5SSQ6 148 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms