RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 NAV3Q8IVL0 2385 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 IGHV3-49A0A0A0MS15 119 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 CD33P20138 364 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 SLX1AQ9BQ83 275 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 GGACTQ9BVM4 153 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 RAB1BQ9H0U4 201 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
CNOT9-201ENST00000273064 IGHV1-69-2A0A0G2JMI3 117 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 CEACAM1P13688 526 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 CD81P60033 236 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 PITPNC1Q9UKF7 332 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 REV3LO60673 3130 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 GCHFRP30047 84 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 CSN1S1P47710 185 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 PAX9P55771 341 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-201ENST00000273064 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 ARHGAP32A7KAX9 2087 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 SRRM5B3KS81 715 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 RPL23P62829 140 aaKnown RBP12.1□□□□□ -0.47
CNOT9-201ENST00000273064 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
CNOT9-201ENST00000273064 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 K7EQM0 130 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-201ENST00000273064 PPIAL4GP0DN37 164 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-201ENST00000273064 COL8A1P27658 744 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 RASL11BQ9BPW5 248 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 SDF2L1Q9HCN8 221 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 CA1P00915 261 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-201ENST00000273064 IGKV1-16P04430 117 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 RNF138Q8WVD3 245 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-201ENST00000273064 TGOLN2O43493 480 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 SPSB3Q6PJ21 355 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 PRNTQ86SH4 94 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 ANAPC16Q96DE5 110 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 PLSCR4Q9NRQ2 329 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 CENPEQ02224 2701 aa12.09□□□□□ -0.47
CNOT9-201ENST00000273064 TPPP2P59282 170 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 ELOBQ15370 118 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 MUC22E2RYF6 1773 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-201ENST00000273064 TRAV5A0A0B4J249 113 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 J3QW42 95 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
CNOT9-201ENST00000273064 DSPP15924 2871 aaKnown RBP12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BKO60814 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BJP06899 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 PYYP10082 97 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BOP23527 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BBP33778 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BDP58876 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BCP62807 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST2H2BEQ16778 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-201ENST00000273064 FAM57AQ8TBR7 257 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BHQ93079 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BNQ99877 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HIST1H2BMQ99879 126 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 GSX1Q9H4S2 264 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-201ENST00000273064 HSPB7Q9UBY9 170 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 RAXQ9Y2V3 346 aa12.08□□□□□ -0.48
CNOT9-201ENST00000273064 CDX1P47902 265 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 LY6DQ14210 128 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 OR4C13Q8NGP0 309 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 SSC4DQ8WTU2 575 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 RNASE7Q9H1E1 156 aaKnown RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 IL15RAQ13261 267 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 C1QL4Q86Z23 238 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 TBX15Q96SF7 602 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 WASHC3Q9Y3C0 194 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 ZNF729A6NN14 1252 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
CNOT9-201ENST00000273064 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
CNOT9-201ENST00000273064 GFRA3O60609 400 aa12.06□□□□□ -0.48
CNOT9-201ENST00000273064 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
CNOT9-201ENST00000273064 C1orf162Q8NEQ5 155 aaPredicted RBP12.06□□□□□ -0.48
CNOT9-201ENST00000273064 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms