RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
CAPN9-201ENST00000271971 PIGBOS1A0A0B4J2F0 54 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.79
CAPN9-201ENST00000271971 OR9G9P0C7N8 305 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 HLA-DRB5Q30154 266 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.79
CAPN9-201ENST00000271971 AKR1C8PQ5T2L2 129 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 CYB5R2Q6BCY4 276 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 CYB561D1Q8N8Q1 229 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 ADTRPQ96IZ2 230 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 NDUFAF3Q9BU61 184 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 SLC35D1Q9NTN3 355 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 URGCP-MRPS24S4R325 110 aa10.15□□□□□ -0.79
CAPN9-201ENST00000271971 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 A0A1W2PRD5 423 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 A0A1W2PRF3 423 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 A0A1W2PRM7 423 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 H3BP45 60 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 CLDN34H7C241 214 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 CHST1O43916 411 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 IAPPP10997 89 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 KIR2DS2P43631 304 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 BAXQ07812 192 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 SPINK9Q5DT21 86 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 TMEM186Q96B77 213 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 ZFHX3Q15911 3703 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 TRAV3A0A0B4J244 114 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 H0YJW9 148 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 ENSAO43768 121 aaKnown RBP10.14□□□□□ -0.79
CAPN9-201ENST00000271971 RBMXL2O75526 392 aaKnown RBP10.14□□□□□ -0.79
CAPN9-201ENST00000271971 ZNF137PP52743 207 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 PAX2Q02962 417 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 LDLRAD2Q5SZI1 272 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 TMEM183AQ8IXX5 376 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 NABP2Q9BQ15 211 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 LYRM2Q9NU23 88 aaPredicted RBP10.14□□□□□ -0.79
CAPN9-201ENST00000271971 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
CAPN9-201ENST00000271971 ZANQ9Y493 2812 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 IGHV3-72A0A0B4J1Y9 119 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 IGSF23A1L1A6 192 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 M0R1W7 72 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 EREGO14944 169 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 OPN1MWP04001 364 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 OPN1MW2P0DN77 364 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 OPN1MW3P0DN78 364 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 ERVK-16P61578 105 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 PLXNB1O43157 2135 aa10.13□□□□□ -0.79
CAPN9-201ENST00000271971 IGHV2-70DA0A0C4DH43 119 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 VWC2LB2RUY7 222 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 BUB1B-PAK6H3BSN5 160 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 PRRX1P54821 245 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 PAX9P55771 341 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 VAMP2P63027 116 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 HNF4GQ14541 408 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 RTL8BQ17RB0 113 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 HCP5Q6MZN7 132 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 PCGF1Q9BSM1 259 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 QTRT1Q9BXR0 403 aaKnown RBP10.12□□□□□ -0.79
CAPN9-201ENST00000271971 RFNGQ9Y644 331 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 SRRM4A7MD48 611 aaKnown RBP10.12□□□□□ -0.79
CAPN9-201ENST00000271971 SYNGR2O43760 224 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 GCGP01275 180 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 APOA2P02652 100 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 GZMBP10144 247 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 IL3RAP26951 378 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 TNFRSF9Q07011 255 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 USF2Q15853 346 aaPredicted RBP10.12□□□□□ -0.79
CAPN9-201ENST00000271971 OR4A47Q6IF82 309 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 TMEM252Q8N6L7 170 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 OR5AN1Q8NGI8 311 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 TNFRSF14Q92956 283 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 PYGO2Q9BRQ0 406 aa10.12□□□□□ -0.79
CAPN9-201ENST00000271971 NDUFS8O00217 210 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 PRTN3P24158 256 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 RPL23AP62750 156 aaKnown RBP10.11□□□□□ -0.79
CAPN9-201ENST00000271971 FAM90A2PQ658T7 463 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 ATG101Q9BSB4 218 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 RBKSQ9H477 322 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 SRD5A3Q9H8P0 318 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.11□□□□□ -0.79
CAPN9-201ENST00000271971 HOXB4P17483 251 aaPredicted RBP10.11□□□□□ -0.79
CAPN9-201ENST00000271971 LHFPL4Q7Z7J7 247 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 HARBI1Q96MB7 349 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 P2RX4Q99571 388 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 HSPB7Q9UBY9 170 aa10.11□□□□□ -0.79
CAPN9-201ENST00000271971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPN9-201ENST00000271971 CST7O76096 145 aa10.1□□□□□ -0.79
CAPN9-201ENST00000271971 MYOD1P15172 320 aa10.1□□□□□ -0.79
CAPN9-201ENST00000271971 TAS2R30P59541 319 aa10.1□□□□□ -0.79
CAPN9-201ENST00000271971 RELBQ01201 579 aa10.1□□□□□ -0.79
CAPN9-201ENST00000271971 TMEM267Q0VDI3 215 aaPredicted RBP10.1□□□□□ -0.79
CAPN9-201ENST00000271971 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms