RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 LOC105371267A0A1B0GV96 52 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 VN1R4Q7Z5H5 301 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 NABP2Q9BQ15 211 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 COL5A3P25940 1745 aaPredicted RBP10.34□□□□□ -0.75
SRRM4-201ENST00000267260 GREB1LQ9C091 1923 aaPredicted RBP10.34□□□□□ -0.75
SRRM4-201ENST00000267260 CCL3P10147 92 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 CIARTQ8N365 385 aaPredicted RBP10.34□□□□□ -0.75
SRRM4-201ENST00000267260 MGAMO43451 1857 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 EML5Q05BV3 1969 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 TM4SF5O14894 197 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 UNC119Q13432 240 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 DCAF10Q5QP82 559 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 VWC2LB2RUY7 222 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 TICRRQ7Z2Z1 1910 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 TRAV24A0A0B4J272 114 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 LOC390937A0A1W2PQ73 354 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 CENPVQ7Z7K6 275 aaPredicted RBP10.34□□□□□ -0.75
SRRM4-201ENST00000267260 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 C9JCJ5 164 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 OCIAD2Q56VL3 154 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 EPDR1Q9UM22 224 aa10.34□□□□□ -0.75
SRRM4-201ENST00000267260 LINC00587B1AMM8 73 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TSPAN7P41732 249 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 PRSS12P56730 875 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 FAM89BQ8N5H3 189 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 A0A1W2PPE3 182 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 SRSF1Q07955 248 aaKnown RBP eCLIP10.33□□□□□ -0.76
SRRM4-201ENST00000267260 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 VKORC1Q9BQB6 163 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 NCOR1P1Q9H4R4 102 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TOMM40O96008 361 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 CISD3P0C7P0 127 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 CCL8P80075 99 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 DTX1Q86Y01 620 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TMEM42Q69YG0 159 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 OR9G1Q8NH87 305 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TTTY12Q9BZ98 90 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 C5orf66Q9H5L9 145 aa10.33□□□□□ -0.76
SRRM4-201ENST00000267260 TRAV2A0A0B4J234 112 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 FOXH1O75593 365 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 NPCDR1Q9BY65 106 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 CD8AP01732 235 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 FAM214BQ7L5A3 538 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 CHCHD1Q96BP2 118 aaKnown RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 C8orf82Q6P1X6 216 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 TRBV5-5A0A0J9YX44 114 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 DXOO77932 396 aaKnown RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 PSG4Q00888 419 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 C3AR1Q16581 482 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 CCL19Q99731 98 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 IGKCP01834 107 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 TDGF1P3P51864 188 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 ZNF721Q8TF20 911 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 FAM60AQ9NP50 221 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 ZSWIM8A7E2V4 1837 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 SPINT1O43278 529 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 HBDP02042 147 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 CD69Q07108 199 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 PPIAL4CA0A0B4J2A2 164 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 LINC01565O15544 149 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 PPIAL4GP0DN37 164 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 NANOS3P60323 173 aaKnown RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
SRRM4-201ENST00000267260 RLFQ13129 1914 aa10.32□□□□□ -0.76
SRRM4-201ENST00000267260 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 C9orf40Q8IXQ3 194 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 FER1L6-AS1Q8NA97 138 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 REG1AP05451 166 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 NBEAP1P0C6P0 100 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 ABHD12Q8N2K0 398 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 PLXNA3P51805 1871 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 SERF1AO75920 110 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 IFI6P09912 130 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 H2BFSP57053 126 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 OR11H4Q8NGC9 324 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 ASCL2Q99929 193 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 ICAM4Q14773 271 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 CT83Q5H943 113 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 Q6ZS52 159 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms