RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TRBV9A0A0B4J1U6 114 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 C13orf42A0A1B0GVH6 325 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 TCRBV4S1A1TA0A5B7 111 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 PRH1P02810 166 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 HOXA1P49639 335 aaPredicted RBP12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 ERHP84090 104 aaKnown RBP12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 ZFP57Q9NU63 452 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 TSSC4Q9Y5U2 329 aaPredicted RBP12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 FAM25EA8MYX2 175 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 SSNA1O43805 119 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 TRGV3P03979 118 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 DEFA4P12838 97 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 ID3Q02535 119 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 RBKSQ9H477 322 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
CHCHD3-201ENST00000262570 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 TPPP2P59282 170 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 GSG1LQ6UXU4 331 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 ZNF114Q8NC26 417 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 UBE2E2Q96LR5 201 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 P2RX4Q99571 388 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
CHCHD3-201ENST00000262570 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 SNCAP37840 140 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 NKX2-1P43699 371 aaPredicted RBP12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 RPL23AP62750 156 aaKnown RBP12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 C2orf50Q96LR7 162 aa12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 HEYLQ9NQ87 328 aaPredicted RBP12.92□□□□□ -0.34
CHCHD3-201ENST00000262570 GOSR2O14653 212 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 SYNGR2O43760 224 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 HIST1H1BP16401 226 aaKnown RBP12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 MFAP2P55001 183 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 RHOGP84095 191 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 IL15RAQ13261 267 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 USMG5Q96IX5 58 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 HIPK2Q9H2X6 1198 aa12.91□□□□□ -0.34
CHCHD3-201ENST00000262570 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 MED6O75586 246 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 OR2J3O76001 311 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 SIX6O95475 246 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 DEFA5Q01523 94 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 C11orf87Q6NUJ2 197 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 SLC25A24Q6NUK1 477 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 TRRAPQ9Y4A5 3859 aa12.9□□□□□ -0.34
CHCHD3-201ENST00000262570 A0A1W2PRX2 142 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 CYB5BO43169 146 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 HTR2BP41595 481 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 H2BFSP57053 126 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 THYN1Q9P016 225 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 FBXL7Q9UJT9 491 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 U3KQ87 197 aa12.9□□□□□ -0.35
CHCHD3-201ENST00000262570 NDUFB8O95169 186 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 SCGB1D2O95969 90 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 MBPP02686 304 aaPredicted RBP12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 SUB1P53999 127 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■■□ 24.8
CHCHD3-201ENST00000262570 C15orf32Q32M92 178 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 CIB3Q96Q77 187 aaPredicted RBP12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 GNB4Q9HAV0 340 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
CHCHD3-201ENST00000262570 I3L521 148 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 WRBO00258 174 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 IGHV3-11P01762 117 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 IAPPP10997 89 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 C4orf3Q8WVX3 66 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 NMES1Q9C002 83 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 MED28Q9H204 178 aa12.88□□□□□ -0.35
CHCHD3-201ENST00000262570 LY86O95711 162 aa12.87□□□□□ -0.35
CHCHD3-201ENST00000262570 CXCL3P19876 107 aa12.87□□□□□ -0.35
CHCHD3-201ENST00000262570 CYCSP99999 105 aaKnown RBP12.87□□□□□ -0.35
CHCHD3-201ENST00000262570 RUNX1Q01196 453 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms