RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PPP1R27Q86WC6 154 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 KLHDC1Q8N7A1 406 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 INO80EQ8NBZ0 244 aaPredicted RBP9.12□□□□□ -0.95
PFDN1-201ENST00000261813 SGMS2Q8NHU3 365 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 WIPF2Q8TF74 440 aaPredicted RBP9.12□□□□□ -0.95
PFDN1-201ENST00000261813 ZNF747Q9BV97 191 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 HIPK2Q9H2X6 1198 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 OR51B2Q9Y5P1 312 aa9.12□□□□□ -0.95
PFDN1-201ENST00000261813 IGHV7-81A0A0B4J1V7 117 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 A0A1W2PN81 502 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 K7EPK0 472 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 FCN1O00602 326 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 LYL1P12980 280 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 CHRNA7P36544 502 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 RPL23AP62750 156 aaKnown RBP9.11□□□□□ -0.95
PFDN1-201ENST00000261813 PRSS8Q16651 343 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
PFDN1-201ENST00000261813 ZNF546Q86UE3 836 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 C3orf56Q8N813 242 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 NOL4LQ96MY1 436 aaPredicted RBP9.11□□□□□ -0.95
PFDN1-201ENST00000261813 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
PFDN1-201ENST00000261813 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
PFDN1-201ENST00000261813 WSB1Q9Y6I7 421 aa9.11□□□□□ -0.95
PFDN1-201ENST00000261813 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 P2RY1P47900 373 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 SSBP2P81877 361 aaPredicted RBP9.1□□□□□ -0.95
PFDN1-201ENST00000261813 NDPQ00604 133 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 IZUMO4Q1ZYL8 232 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 MRGPRG-AS1Q2M3A8 158 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 HIST2H2BDQ6DRA6 164 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 C10orf99Q6UWK7 81 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 QTRT1Q9BXR0 403 aaKnown RBP9.1□□□□□ -0.95
PFDN1-201ENST00000261813 SLC25A31Q9H0C2 315 aa9.1□□□□□ -0.95
PFDN1-201ENST00000261813 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 TRAV14DV4A0A0A6YYC5 116 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 A0A0D9SG52 128 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 KCNAB3O43448 404 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 TSC22D2O75157 780 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 CA2P00918 260 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 EIF2B2P49770 351 aaKnown RBP9.09□□□□□ -0.95
PFDN1-201ENST00000261813 OR2B8PP59922 312 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 POLR2GP62487 172 aaKnown RBP eCLIP9.09□□□□□ -0.95
PFDN1-201ENST00000261813 CX3CL1P78423 397 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.95
PFDN1-201ENST00000261813 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 PJVKQ0ZLH3 352 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 ZNF562Q6V9R5 426 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 STPG2Q8N412 459 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 DTD1Q8TEA8 209 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 DCUN1D4Q92564 292 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 CITED1Q99966 193 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 RNF126Q9BV68 326 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 RBKSQ9H477 322 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 ZNF430Q9H8G1 570 aaPredicted RBP9.09□□□□□ -0.95
PFDN1-201ENST00000261813 PLEKHA3Q9HB20 300 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 MBD2Q9UBB5 411 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 FBXO7Q9Y3I1 522 aa9.09□□□□□ -0.95
PFDN1-201ENST00000261813 TRAV3A0A0B4J244 114 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 TEX50A0A1B0GTY4 177 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 AP4M1O00189 453 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 ATP6V0E1O15342 81 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 SSSCA1O60232 199 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 CNIH1O95406 144 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 IGF1P05019 195 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 SUB1P53999 127 aaKnown RBP eCLIP9.08□□□□□ -0.96
PFDN1-201ENST00000261813 OR2F1Q13607 317 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 ZNF345Q14585 488 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 ACOT7LQ6ZUV0 252 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 C11orf44Q8N8P7 122 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 MAGT1Q9H0U3 335 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 HEYLQ9NQ87 328 aaPredicted RBP9.08□□□□□ -0.96
PFDN1-201ENST00000261813 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 RCL1Q9Y2P8 373 aaKnown RBP9.08□□□□□ -0.96
PFDN1-201ENST00000261813 U3KQ87 197 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
PFDN1-201ENST00000261813 G3V3Q6 166 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 SMLR1H3BR10 107 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 ARPC5O15511 151 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 CD28P10747 220 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 EGR2P11161 476 aaPredicted RBP9.07□□□□□ -0.96
PFDN1-201ENST00000261813 HTR2BP41595 481 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 RPL27AP46776 148 aaKnown RBP9.07□□□□□ -0.96
PFDN1-201ENST00000261813 HOXA1P49639 335 aaPredicted RBP9.07□□□□□ -0.96
PFDN1-201ENST00000261813 RAB11AP62491 216 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 CFHR3Q02985 330 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 BAXQ07812 192 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 CD300CQ08708 224 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 TNXAQ16473 311 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 Q5BKY6 102 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 CENPVQ7Z7K6 275 aaPredicted RBP9.07□□□□□ -0.96
PFDN1-201ENST00000261813 ZNF329Q86UD4 541 aa9.07□□□□□ -0.96
PFDN1-201ENST00000261813 STX12Q86Y82 276 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms