RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CALYQ9NYX4 217 aa13.59□□□□□ -0.23
SREBF1-201ENST00000261646 IGLV3-32A0A0A0MS00 114 aa13.58□□□□□ -0.23
SREBF1-201ENST00000261646 HIGD1CA8MV81 97 aa13.58□□□□□ -0.23
SREBF1-201ENST00000261646 SELENOTP62341 195 aa13.58□□□□□ -0.23
SREBF1-201ENST00000261646 PRR31Q5SQ13 230 aa13.58□□□□□ -0.23
SREBF1-201ENST00000261646 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.23
SREBF1-201ENST00000261646 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.246e-7■■■■■ 28.9
SREBF1-201ENST00000261646 EFNB3Q15768 340 aa13.58□□□□□ -0.24
SREBF1-201ENST00000261646 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.24
SREBF1-201ENST00000261646 LGALS4P56470 323 aa13.58□□□□□ -0.24
SREBF1-201ENST00000261646 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
SREBF1-201ENST00000261646 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
SREBF1-201ENST00000261646 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
SREBF1-201ENST00000261646 M0R296 226 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 TFF1P04155 84 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 GPX1P07203 203 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ZNRF1Q8ND25 227 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 OR10AG1Q8NH19 301 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-201ENST00000261646 IGLV3-12A0A075B6K2 115 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 FAM157AC9JC47 383 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 CELA3AP09093 270 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 STAG3L2P0CL84 134 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 STAG3L3P0CL85 134 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 RPL11P62913 178 aaKnown RBP13.57□□□□□ -0.24
SREBF1-201ENST00000261646 UBE2V1Q13404 147 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 NGBQ9NPG2 151 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ORM1P02763 201 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ACP1P24666 158 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 PRRX1P54821 245 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
SREBF1-201ENST00000261646 TNFRSF19Q9NS68 423 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 PLXNA2O75051 1894 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF785A8K8V0 405 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 IFNL4K9M1U5 179 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 CRYABP02511 175 aaKnown RBP13.57□□□□□ -0.24
SREBF1-201ENST00000261646 FOXG1P55316 489 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-201ENST00000261646 TREML4Q6UXN2 200 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 RNF7Q9UBF6 113 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 JPT1Q9UK76 154 aa13.57□□□□□ -0.24
SREBF1-201ENST00000261646 TMEM42Q69YG0 159 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 CCL13Q99616 98 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 RNF115Q9Y4L5 304 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF716A6NP11 495 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 RIPPLY3P57055 190 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 TM4SF20Q53R12 229 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 GRAMD2BQ96HH9 432 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 RASL11BQ9BPW5 248 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 C19orf24Q9BVV8 132 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 IGKV1-6A0A0C4DH72 117 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 OR10J3Q5JRS4 329 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 C1orf210Q8IVY1 113 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 CDX2Q99626 313 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-201ENST00000261646 GGTLC1Q9BX51 225 aa13.56□□□□□ -0.24
SREBF1-201ENST00000261646 CREBBPQ92793 2442 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 IGHV3-72A0A0B4J1Y9 119 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 IGKV1D-33P01593 117 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 IGKV1-33P01594 117 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF497Q6ZNH5 498 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 SEPSECSQ9HD40 501 aaKnown RBP13.55□□□□□ -0.24
SREBF1-201ENST00000261646 CRIM1Q9NZV1 1036 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 A0A1B0GWJ7 208 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 DLL1O00548 723 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 OR9G9P0C7N8 305 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 COX7A1P24310 79 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 RELQ04864 619 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-201ENST00000261646 PMS2CLQ68D20 193 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 ZADH2Q8N4Q0 377 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 RPEQ96AT9 228 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 IGLV3-19P01714 112 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
SREBF1-201ENST00000261646 Q6ZWC4 215 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 TCF24Q7RTU0 167 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 UFC1Q9Y3C8 167 aa13.55□□□□□ -0.24
SREBF1-201ENST00000261646 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 TSPOP30536 169 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF146Q15072 292 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 MPV17L2Q567V2 206 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 SCGB1D4Q6XE38 83 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 LINC00470Q9BZP3 86 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 H3BUT2 72 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 PEX7O00628 323 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 LINC00205P59089 165 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 LYPD6Q86Y78 171 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 FNDC4Q9H6D8 234 aaPredicted RBP13.54□□□□□ -0.24
SREBF1-201ENST00000261646 HILPDAQ9Y5L2 63 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 COL6A6A6NMZ7 2263 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 A1L4Q6 167 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 REG1AP05451 166 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 CKS2P33552 79 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
SREBF1-201ENST00000261646 LOXL4Q96JB6 756 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 IMMP1LQ96LU5 166 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms