RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MBNL2Q5VZF2 373 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 CD300LDQ6UXZ3 194 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 ODF3L1Q8IXM7 274 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 PIFOQ8TCI5 191 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 EMCNQ9ULC0 261 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 CHST2Q9Y4C5 530 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 IGHV2-70DA0A0C4DH43 119 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 A0A1B0GW15 77 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 PQLC2LA1A4F0 135 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 LYNX1G3V0Z9 82 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 OIP5O43482 229 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 AMY1AP04745 511 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 LYNX1P0DP58 116 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 CEBPDP49716 269 aaPredicted RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 RPL15P61313 204 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 TMEM91Q6ZNR0 172 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 AQP3Q92482 292 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 NPIPB3Q92617 1050 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 LAMB4A4D0S4 1761 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 TRBV20OR9-2A0A075B6H5 130 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 TCRBV5S1A1TA0A578 114 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 CCSO14618 274 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 PIN1P1O15428 100 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 PLPP2O43688 288 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 HLA-DRB1P01911 266 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SAA4P35542 130 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 CDKN1BP46527 198 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNF38-201ENST00000259605 PSG7Q13046 419 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 PIGYQ3MUY2 71 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 ABLIM2Q6H8Q1 611 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 TMEM219Q86XT9 240 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 HIST1H2BAQ96A08 127 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 TRAV24A0A0B4J272 114 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 MARCH11A6NNE9 402 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 UBE2CO00762 179 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 NDUFB6O95139 128 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 PEBP1P30086 187 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 GAS1P54826 345 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 C1QL4Q86Z23 238 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 STPG2Q8N412 459 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 MDS2Q8NDY4 140 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FANCD2OSQ96PS1 177 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 GGTLC1Q9BX51 225 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 JKAMPQ9P055 326 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 KCNE5Q9UJ90 142 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 DOCK2Q92608 1830 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 IGHV2-26A0A0B4J1V2 119 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FABP5P3A8MUU1 101 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 CCL24O00175 119 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FGF16O43320 207 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 PSG2P11465 335 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 LYL1P12980 280 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FHITP49789 147 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FBLN7Q53RD9 439 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 C1QL2Q7Z5L3 287 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 MAPK1IP1LQ8NDC0 245 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 UBE2E2Q96LR5 201 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 IFI27L2Q9H2X8 130 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 MRPL27Q9P0M9 148 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 SPRR3Q9UBC9 169 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SLC25A15Q9Y619 301 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SCN9AQ15858 1988 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 NUP98P52948 1817 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SCN11AQ9UI33 1791 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 FAM74A7A6NL05 159 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 B4DEV8 164 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 H3BUA1 57 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 ZFPL1O95159 310 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 ATP5G1P05496 136 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 ATP5G3P48201 142 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 EFNB3Q15768 340 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 LBHQ53QV2 105 aaPredicted RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 OTPQ5XKR4 325 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 LINC00299Q6ZSB3 139 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 CYP2G1PQ6ZSU1 146 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 APCDD1LQ8NCL9 501 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SMIM4Q8WVI0 70 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 NRG4Q8WWG1 115 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SOSTQ9BQB4 213 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SRSF8Q9BRL6 282 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 GGACTQ9BVM4 153 aa3.36□□□□□ -1.87
RNF38-201ENST00000259605 SPTAN1Q13813 2472 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 BAZ2AQ9UIF9 1905 aaKnown RBP3.36□□□□□ -1.87
RNF38-201ENST00000259605 LOXHD1Q8IVV2 1947 aa3.35□□□□□ -1.87
RNF38-201ENST00000259605 IGKV2D-24A0A075B6R9 120 aa3.35□□□□□ -1.87
RNF38-201ENST00000259605 IGHV3-66A0A0C4DH42 116 aa3.35□□□□□ -1.87
RNF38-201ENST00000259605 INS-IGF2F8WCM5 200 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms