RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TNFSF14O43557 240 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 PSG4Q00888 419 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 LINC00305Q7Z4B0 112 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 GHRHP01286 108 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 C3orf79P0CE67 100 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 TFF3Q07654 80 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 DEFB109BQ30KR1 87 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 PLNP26678 52 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 LEPP41159 167 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRA2AQ13595 282 aaKnown RBP eCLIP11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 ADAMTSL5Q6ZMM2 481 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 METTL26Q96S19 204 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 EDA2RQ9HAV5 297 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRAV1-1A0A0B4J248 108 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A1W2PS18 150 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 PATE3B3GLJ2 98 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 PPBPP02775 128 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 LOXL3P58215 753 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 CKAP5Q14008 2032 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 F2RL2O00254 374 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 GFRA3O60609 400 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 IGKV1D-16P01601 117 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 MFAP4P55083 255 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 INO80CQ6PI98 192 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 RAB1BQ9H0U4 201 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A087X0K7 114 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 IGKCP01834 107 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 PSG3Q16557 428 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 ASPHD2Q6ICH7 369 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 WDR82Q6UXN9 313 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 LHFPL6Q9Y693 200 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 H3BRM9 83 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 SYNGR3O43761 229 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 RNASEH2CQ8TDP1 164 aaKnown RBP11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 RTTNQ86VV8 2226 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 GDF15Q99988 308 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 TM2D1Q9BX74 207 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 JPT1Q9UK76 154 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 DTX4Q9Y2E6 619 aa11.15□□□□□ -0.62
PCDHGA3-201ENST00000253812 CGB1A6NKQ9 187 aa11.15□□□□□ -0.63
PCDHGA3-201ENST00000253812 ZNF815PA8K554 130 aa11.15□□□□□ -0.63
PCDHGA3-201ENST00000253812 MOSP00540 346 aa11.15□□□□□ -0.63
PCDHGA3-201ENST00000253812 PEBP1P30086 187 aaKnown RBP11.15□□□□□ -0.63
PCDHGA3-201ENST00000253812 TRGV8A0A0C4DH27 118 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 TIMP3P35625 211 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 GPX1P07203 203 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 CCL4P13236 92 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 SSPNQ14714 243 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 ZNF56Q15929 161 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 SLC25A15Q9Y619 301 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 ABCA1O95477 2261 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 IFI6P09912 130 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
PCDHGA3-201ENST00000253812 BRCA1P38398 1863 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 CYTL1Q9NRR1 136 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 WDR90Q96KV7 1748 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 H7C1H1 209 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms